This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


2i18

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (06:41, 1 May 2024) (edit) (undo)
 
(9 intermediate revisions not shown.)
Line 1: Line 1:
-
{{Seed}}
 
-
[[Image:2i18.png|left|200px]]
 
-
<!--
+
==The refined structure of C-terminal domain of an EF-hand Calcium binding Protein from Entamoeba Histolytica==
-
The line below this paragraph, containing "STRUCTURE_2i18", creates the "Structure Box" on the page.
+
<StructureSection load='2i18' size='340' side='right'caption='[[2i18]]' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[2i18]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Entamoeba_histolytica Entamoeba histolytica]. This structure supersedes the now removed PDB entry [http://oca.weizmann.ac.il/oca-bin/send-pdb?obs=1&id=2ev7 2ev7]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2I18 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2I18 FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Solution NMR</td></tr>
-
-->
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=LA:LANTHANUM+(III)+ION'>LA</scene></td></tr>
-
{{STRUCTURE_2i18| PDB=2i18 | SCENE= }}
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2i18 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2i18 OCA], [https://pdbe.org/2i18 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2i18 RCSB], [https://www.ebi.ac.uk/pdbsum/2i18 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2i18 ProSAT]</span></td></tr>
-
 
+
</table>
-
===The refined structure of C-terminal domain of an EF-hand Calcium binding Protein from Entamoeba Histolytica===
+
== Function ==
-
 
+
[https://www.uniprot.org/uniprot/CALBP_ENTHI CALBP_ENTHI] Could play a role in the transduction of secondary messages on binding of calcium.
-
 
+
== Evolutionary Conservation ==
-
<!--
+
[[Image:Consurf_key_small.gif|200px|right]]
-
The line below this paragraph, {{ABSTRACT_PUBMED_16981203}}, adds the Publication Abstract to the page
+
Check<jmol>
-
(as it appears on PubMed at http://www.pubmed.gov), where 16981203 is the PubMed ID number.
+
<jmolCheckbox>
-
-->
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/i1/2i18_consurf.spt"</scriptWhenChecked>
-
{{ABSTRACT_PUBMED_16981203}}
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
-
 
+
<text>to colour the structure by Evolutionary Conservation</text>
-
==About this Structure==
+
</jmolCheckbox>
-
2I18 is a 1 chain structure of sequence from [http://en.wikipedia.org/wiki/Entamoeba_histolytica Entamoeba histolytica]. This structure supersedes the now removed PDB entry [http://oca.weizmann.ac.il/oca-bin/send-pdb?obs=1&id=2ev7 2ev7]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2I18 OCA].
+
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2i18 ConSurf].
-
 
+
<div style="clear:both"></div>
-
==Reference==
+
__TOC__
-
<ref group="xtra">PMID:16981203</ref><references group="xtra"/>
+
</StructureSection>
[[Category: Entamoeba histolytica]]
[[Category: Entamoeba histolytica]]
-
[[Category: Chary, K V.R]]
+
[[Category: Large Structures]]
-
[[Category: Mukherjee, S.]]
+
[[Category: Chary KVR]]
-
[[Category: Mustafi, S M.]]
+
[[Category: Mukherjee S]]
-
[[Category: Alpha helix]]
+
[[Category: Mustafi SM]]
-
[[Category: Beta sheet]]
+
-
[[Category: Calcium binding loop]]
+
-
 
+
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Feb 16 20:29:40 2009''
+

Current revision

The refined structure of C-terminal domain of an EF-hand Calcium binding Protein from Entamoeba Histolytica

PDB ID 2i18

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools