2pen
From Proteopedia
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- | {{Seed}} | ||
- | [[Image:2pen.png|left|200px]] | ||
- | + | ==Crystal structure of RbcX, crystal form I== | |
- | + | <StructureSection load='2pen' size='340' side='right'caption='[[2pen]], [[Resolution|resolution]] 2.80Å' scene=''> | |
- | + | == Structural highlights == | |
- | + | <table><tr><td colspan='2'>[[2pen]] is a 6 chain structure with sequence from [https://en.wikipedia.org/wiki/Synechococcus_sp._PCC_7002 Synechococcus sp. PCC 7002]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2PEN OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2PEN FirstGlance]. <br> | |
- | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.8Å</td></tr> | |
- | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2pen FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2pen OCA], [https://pdbe.org/2pen PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2pen RCSB], [https://www.ebi.ac.uk/pdbsum/2pen PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2pen ProSAT]</span></td></tr> | |
- | + | </table> | |
- | + | == Function == | |
- | + | [https://www.uniprot.org/uniprot/RBCX_SYNP2 RBCX_SYNP2] An RbcL-specific chaperone. Required for assembly of the RbcL8 core, acting downstream of the major chaperonin (GroEL-GroES). Acts on newly folded RbcL, has a transient dynamic interaction with RbcL and is eventually displaced by RbcS (PubMed:17574029). The central cleft of the RbcX homodimer (RbcX2) binds the C-terminus of an RbcL monomer, stabilizing the C-terminus and probably preventing its reassociation with chaperonin GroEL-ES. At the same time the peripheral region of RbcX2 binds a second RbcL monomer, bridging the RbcL homodimers in the correct orientation. The RbcX2(2)-bound RbcL dimers then assemble into the RbcL8 core (RbcL8-(RbcX2)8). RbcS binding triggers the release of RbcX2 (By similarity). Required for optimal reconstitution of RuBisCO into its RbcL8S8 holoenzyme form upon expression of rbcL-rbcS subunits in E.coli, and probably also in situ. A frameshift mutation that replaces half the protein reduces accumulation of both RbcL and RbcS subunits and halves activity of RuBisCO in situ and in E.coli (PubMed:15564522).[UniProtKB:Q44212]<ref>PMID:15564522</ref> <ref>PMID:17574029</ref> | |
- | + | == Evolutionary Conservation == | |
- | + | [[Image:Consurf_key_small.gif|200px|right]] | |
- | < | + | Check<jmol> |
- | + | <jmolCheckbox> | |
- | + | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/pe/2pen_consurf.spt"</scriptWhenChecked> | |
- | + | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | |
- | + | <text>to colour the structure by Evolutionary Conservation</text> | |
- | + | </jmolCheckbox> | |
- | == | + | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2pen ConSurf]. |
- | + | <div style="clear:both"></div> | |
- | + | == References == | |
- | == | + | <references/> |
- | < | + | __TOC__ |
- | [[ | + | </StructureSection> |
- | [[ | + | [[Category: Large Structures]] |
- | [[ | + | [[Category: Synechococcus sp. PCC 7002]] |
- | [[Category: | + | [[Category: Bracher A]] |
- | [[Category: | + | [[Category: Hartl FU]] |
- | [[Category: | + | [[Category: Hayer-Hartl M]] |
- | [[Category: | + | [[Category: Saschenbrecker S]] |
- | [[Category: | + | [[Category: Vasudeva Rao B]] |
- | [[Category: | + | [[Category: Vasudeva Rao K]] |
- | [[Category: | + | |
- | + | ||
- | + |
Current revision
Crystal structure of RbcX, crystal form I
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