1bm4

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{{Seed}}
 
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[[Image:1bm4.png|left|200px]]
 
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==MOMLV CAPSID PROTEIN MAJOR HOMOLOGY REGION PEPTIDE ANALOG==
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The line below this paragraph, containing "STRUCTURE_1bm4", creates the "Structure Box" on the page.
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<StructureSection load='1bm4' size='340' side='right'caption='[[1bm4]]' scene=''>
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You may change the PDB parameter (which sets the PDB file loaded into the applet)
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== Structural highlights ==
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or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
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<table><tr><td colspan='2'>[[1bm4]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Moloney_murine_leukemia_virus Moloney murine leukemia virus]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1BM4 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1BM4 FirstGlance]. <br>
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or leave the SCENE parameter empty for the default display.
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Solution NMR</td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1bm4 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1bm4 OCA], [https://pdbe.org/1bm4 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1bm4 RCSB], [https://www.ebi.ac.uk/pdbsum/1bm4 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1bm4 ProSAT]</span></td></tr>
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{{STRUCTURE_1bm4| PDB=1bm4 | SCENE= }}
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</table>
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== Function ==
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===MOMLV CAPSID PROTEIN MAJOR HOMOLOGY REGION PEPTIDE ANALOG===
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[https://www.uniprot.org/uniprot/GAG_MLVMS GAG_MLVMS] Gag polyprotein plays a role in budding and is processed by the viral protease during virion maturation outside the cell. During budding, it recruits, in a PPXY-dependent or independent manner, Nedd4-like ubiquitin ligases that conjugate ubiquitin molecules to Gag, or to Gag binding host factors. Interaction with HECT ubiquitin ligases probably link the viral protein to the host ESCRT pathway and facilitate release.<ref>PMID:19864377</ref> Matrix protein p15 targets Gag and gag-pol polyproteins to the plasma membrane via a multipartite membrane binding signal, that includes its myristoylated N-terminus. Also mediates nuclear localization of the preintegration complex (By similarity).<ref>PMID:19864377</ref> Capsid protein p30 forms the spherical core of the virion that encapsulates the genomic RNA-nucleocapsid complex (By similarity).<ref>PMID:19864377</ref> Nucleocapsid protein p10 is involved in the packaging and encapsidation of two copies of the genome. Binds with high affinity to conserved UCUG elements within the packaging signal, located near the 5'-end of the genome. This binding is dependent on genome dimerization.<ref>PMID:19864377</ref>
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== Evolutionary Conservation ==
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[[Image:Consurf_key_small.gif|200px|right]]
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Check<jmol>
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The line below this paragraph, {{ABSTRACT_PUBMED_9799104}}, adds the Publication Abstract to the page
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<jmolCheckbox>
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(as it appears on PubMed at http://www.pubmed.gov), where 9799104 is the PubMed ID number.
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<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/bm/1bm4_consurf.spt"</scriptWhenChecked>
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<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
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{{ABSTRACT_PUBMED_9799104}}
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<text>to colour the structure by Evolutionary Conservation</text>
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</jmolCheckbox>
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==About this Structure==
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1bm4 ConSurf].
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1BM4 is a 1 chain structure. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1BM4 OCA].
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<div style="clear:both"></div>
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== References ==
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==Reference==
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<references/>
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<ref group="xtra">PMID:9799104</ref><references group="xtra"/>
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__TOC__
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[[Category: Barklis, E.]]
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</StructureSection>
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[[Category: Clish, C B.]]
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[[Category: Large Structures]]
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[[Category: Peyton, D H.]]
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[[Category: Moloney murine leukemia virus]]
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[[Category: Capsid]]
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[[Category: Barklis E]]
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[[Category: Major homology region]]
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[[Category: Clish CB]]
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[[Category: Mhr]]
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[[Category: Peyton DH]]
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[[Category: Moloney murine leukemia virus capsid protein]]
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[[Category: Momlv]]
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[[Category: Mu-mlv]]
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Feb 16 20:49:38 2009''
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Current revision

MOMLV CAPSID PROTEIN MAJOR HOMOLOGY REGION PEPTIDE ANALOG

PDB ID 1bm4

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