This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.

Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


Template:STRUCTURE 1pjr

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (09:22, 11 March 2013) (edit) (undo)
 
(One intermediate revision not shown.)
Line 1: Line 1:
{{Structure
{{Structure
-
|PDB= {{{PDB}}}|SCENE={{{SCENE|}}}|SIZE={{{SIZE|350}}}|CAPTION={{{CAPTION|[[1pjr]], resolution 2.50&Aring; (<scene name='initialview01'>default scene</scene>)}}}
+
|PDB= {{{PDB}}}|SCENE={{{SCENE|}}}|SIZE={{{SIZE|350}}}|CAPTION={{{CAPTION|[[1pjr]], [[Resolution|resolution]] 2.50&Aring; (<scene name='initialview01'>default scene</scene>)}}}
|GENE= PCRA ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=1422 Geobacillus stearothermophilus])
|GENE= PCRA ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=1422 Geobacillus stearothermophilus])
-
|DOMAIN=<span class='plainlinks'>[http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=PRK10919 PRK10919], [http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=PRK11773 uvrD]</span>
+
|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1pjr FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1pjr OCA], [http://www.rcsb.org/pdb/explore.do?structureId=1pjr RCSB], [http://www.ebi.ac.uk/pdbsum/1pjr PDBsum]</span>
-
|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1pjr FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1pjr OCA], [http://www.ebi.ac.uk/pdbsum/1pjr PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=1pjr RCSB]</span>
+
|FUNCTION={{GO|id=GO:0004003 | text = ATP-dependent DNA helicase activity}}{{GO|id=GO:0000166 | text = nucleotide binding}}{{GO|id=GO:0005524 | text = ATP binding}}{{GO|id=GO:0016787 | text = hydrolase activity}}{{GO|id=GO:0004386 | text = helicase activity}}{{GO|id=GO:0003677 | text = DNA binding}}
|FUNCTION={{GO|id=GO:0004003 | text = ATP-dependent DNA helicase activity}}{{GO|id=GO:0000166 | text = nucleotide binding}}{{GO|id=GO:0005524 | text = ATP binding}}{{GO|id=GO:0016787 | text = hydrolase activity}}{{GO|id=GO:0004386 | text = helicase activity}}{{GO|id=GO:0003677 | text = DNA binding}}
|PROCESS={{GO|id=GO:0006281 | text = DNA repair}}{{GO|id=GO:0006268 | text = DNA unwinding during replication}}
|PROCESS={{GO|id=GO:0006281 | text = DNA repair}}{{GO|id=GO:0006268 | text = DNA unwinding during replication}}
|COMPONENT={{GO|id=GO:0005737 | text = cytoplasm}}
|COMPONENT={{GO|id=GO:0005737 | text = cytoplasm}}
|SARESOURCES=<span class='plainlinks'>CATH : [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1pjr001 1Pjr001], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1pjr002 1Pjr002], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1pjr004 1Pjr004], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1pjr003 1Pjr003]<br>InterPro : [http://www.ebi.ac.uk/interpro/ISearch?query=IPR000212 Ipr000212], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR014017 Ipr014017], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR014016 Ipr014016], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR005751 Ipr005751]<br>Pfam : [http://pfam.sanger.ac.uk/family?acc=PF00580 PF00580]<br>SCOP : [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&amp;key=32392 d1pjr_2], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&amp;key=32391 d1pjr_1]<br>UniProt : [http://ca.expasy.org/cgi-bin/niceprot.pl?P56255 P56255]</span>
|SARESOURCES=<span class='plainlinks'>CATH : [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1pjr001 1Pjr001], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1pjr002 1Pjr002], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1pjr004 1Pjr004], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1pjr003 1Pjr003]<br>InterPro : [http://www.ebi.ac.uk/interpro/ISearch?query=IPR000212 Ipr000212], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR014017 Ipr014017], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR014016 Ipr014016], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR005751 Ipr005751]<br>Pfam : [http://pfam.sanger.ac.uk/family?acc=PF00580 PF00580]<br>SCOP : [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&amp;key=32392 d1pjr_2], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&amp;key=32391 d1pjr_1]<br>UniProt : [http://ca.expasy.org/cgi-bin/niceprot.pl?P56255 P56255]</span>
-
|CONSURF={{!}}-
+
|uPDB=1PJR|CONSURF={{!}}-
{{!}} colspan="2" style="background-color:#bac9f7;color:#040d44;vertical-align:top;text-align:left;" {{!}} [[Image:Consurf_key_small.gif|center]]
{{!}} colspan="2" style="background-color:#bac9f7;color:#040d44;vertical-align:top;text-align:left;" {{!}} [[Image:Consurf_key_small.gif|center]]
{{!}}-{{!}} style="background-color:#bac9f7;color:#040d44;vertical-align:top;text-align:left;"
{{!}}-{{!}} style="background-color:#bac9f7;color:#040d44;vertical-align:top;text-align:left;"

Current revision

Drag the structure with the mouse to rotate
1pjr, resolution 2.50Å ()
Gene: PCRA (Geobacillus stearothermophilus)
Resources: FirstGlance, OCA, RCSB, PDBsum
Coordinates: save as pdb, mmCIF, xml


Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/Template:STRUCTURE_1pjr"
Personal tools