1lxm

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (07:37, 14 February 2024) (edit) (undo)
 
(10 intermediate revisions not shown.)
Line 1: Line 1:
-
{{Seed}}
 
-
[[Image:1lxm.png|left|200px]]
 
-
<!--
+
==Crystal Structure of Streptococcus agalactiae Hyaluronate Lyase Complexed with Hexasaccharide Unit of Hyaluronan==
-
The line below this paragraph, containing "STRUCTURE_1lxm", creates the "Structure Box" on the page.
+
<StructureSection load='1lxm' size='340' side='right'caption='[[1lxm]], [[Resolution|resolution]] 2.20&Aring;' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[1lxm]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Streptococcus_agalactiae Streptococcus agalactiae]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1LXM OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1LXM FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.2&#8491;</td></tr>
-
-->
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=BDP:BETA-D-GLUCOPYRANURONIC+ACID'>BDP</scene>, <scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene></td></tr>
-
{{STRUCTURE_1lxm| PDB=1lxm | SCENE= }}
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1lxm FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1lxm OCA], [https://pdbe.org/1lxm PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1lxm RCSB], [https://www.ebi.ac.uk/pdbsum/1lxm PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1lxm ProSAT]</span></td></tr>
 +
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/HYSA_STRA3 HYSA_STRA3]
 +
== Evolutionary Conservation ==
 +
[[Image:Consurf_key_small.gif|200px|right]]
 +
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/lx/1lxm_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1lxm ConSurf].
 +
<div style="clear:both"></div>
-
===Crystal Structure of Streptococcus agalactiae Hyaluronate Lyase Complexed with Hexasaccharide Unit of Hyaluronan===
+
==See Also==
-
 
+
*[[Hyaluronidase 3D structures|Hyaluronidase 3D structures]]
-
 
+
__TOC__
-
<!--
+
</StructureSection>
-
The line below this paragraph, {{ABSTRACT_PUBMED_12130645}}, adds the Publication Abstract to the page
+
[[Category: Large Structures]]
-
(as it appears on PubMed at http://www.pubmed.gov), where 12130645 is the PubMed ID number.
+
-
-->
+
-
{{ABSTRACT_PUBMED_12130645}}
+
-
 
+
-
==About this Structure==
+
-
1LXM is a 1 chain structure of sequence from [http://en.wikipedia.org/wiki/Streptococcus_agalactiae Streptococcus agalactiae]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1LXM OCA].
+
-
 
+
-
==Reference==
+
-
<ref group="xtra">PMID:12130645</ref><references group="xtra"/>
+
-
[[Category: Hyaluronate lyase]]
+
[[Category: Streptococcus agalactiae]]
[[Category: Streptococcus agalactiae]]
-
[[Category: Groot, B L.de.]]
+
[[Category: Jedrzejas MJ]]
-
[[Category: Jedrzejas, M J.]]
+
[[Category: Li S]]
-
[[Category: Li, S.]]
+
[[Category: Mello LV]]
-
[[Category: Mello, L V.]]
+
[[Category: De Groot BL]]
-
[[Category: Hyaluronan]]
+
-
[[Category: Protein-carbohydrate complex]]
+
-
[[Category: Streptococcus agalactiae]]
+
-
 
+
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Feb 16 21:19:39 2009''
+

Current revision

Crystal Structure of Streptococcus agalactiae Hyaluronate Lyase Complexed with Hexasaccharide Unit of Hyaluronan

PDB ID 1lxm

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/1lxm"
Personal tools