2b5h

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (09:16, 14 February 2024) (edit) (undo)
 
(9 intermediate revisions not shown.)
Line 1: Line 1:
-
{{Seed}}
 
-
[[Image:2b5h.png|left|200px]]
 
-
<!--
+
==1.5 A Resolution Crystal Structure of Recombinant R. Norvegicus Cysteine Dioxygenase==
-
The line below this paragraph, containing "STRUCTURE_2b5h", creates the "Structure Box" on the page.
+
<StructureSection load='2b5h' size='340' side='right'caption='[[2b5h]], [[Resolution|resolution]] 1.50&Aring;' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[2b5h]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Rattus_norvegicus Rattus norvegicus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2B5H OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2B5H FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.5&#8491;</td></tr>
-
-->
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=FE:FE+(III)+ION'>FE</scene></td></tr>
-
{{STRUCTURE_2b5h| PDB=2b5h | SCENE= }}
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2b5h FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2b5h OCA], [https://pdbe.org/2b5h PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2b5h RCSB], [https://www.ebi.ac.uk/pdbsum/2b5h PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2b5h ProSAT]</span></td></tr>
 +
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/CDO1_RAT CDO1_RAT]
 +
== Evolutionary Conservation ==
 +
[[Image:Consurf_key_small.gif|200px|right]]
 +
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/b5/2b5h_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2b5h ConSurf].
 +
<div style="clear:both"></div>
-
===1.5 A Resolution Crystal Structure of Recombinant R. Norvegicus Cysteine Dioxygenase===
+
==See Also==
-
 
+
*[[Dioxygenase 3D structures|Dioxygenase 3D structures]]
-
 
+
__TOC__
-
<!--
+
</StructureSection>
-
The line below this paragraph, {{ABSTRACT_PUBMED_16611640}}, adds the Publication Abstract to the page
+
[[Category: Large Structures]]
-
(as it appears on PubMed at http://www.pubmed.gov), where 16611640 is the PubMed ID number.
+
-
-->
+
-
{{ABSTRACT_PUBMED_16611640}}
+
-
 
+
-
==About this Structure==
+
-
2B5H is a 1 chain structure of sequence from [http://en.wikipedia.org/wiki/Rattus_norvegicus Rattus norvegicus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2B5H OCA].
+
-
 
+
-
==Reference==
+
-
<ref group="xtra">PMID:16611640</ref><references group="xtra"/>
+
-
[[Category: Cysteine dioxygenase]]
+
[[Category: Rattus norvegicus]]
[[Category: Rattus norvegicus]]
-
[[Category: Begley, T P.]]
+
[[Category: Begley TP]]
-
[[Category: Hao, Q.]]
+
[[Category: Hao Q]]
-
[[Category: Huang, Q.]]
+
[[Category: Huang Q]]
-
[[Category: Karplus, P A.]]
+
[[Category: Karplus PA]]
-
[[Category: Liu, Q.]]
+
[[Category: Liu Q]]
-
[[Category: Simmons, C R.]]
+
[[Category: Simmons CR]]
-
[[Category: Stipanuk, M H.]]
+
[[Category: Stipanuk MH]]
-
[[Category: Beta-sandwich]]
+
-
[[Category: Cupin fold]]
+
-
[[Category: Jelly-roll topology]]
+
-
[[Category: Tetrahedral iron coordination]]
+
-
 
+
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Feb 16 23:45:12 2009''
+

Current revision

1.5 A Resolution Crystal Structure of Recombinant R. Norvegicus Cysteine Dioxygenase

PDB ID 2b5h

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/2b5h"
Personal tools