2jnz

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{{Seed}}
 
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[[Image:2jnz.png|left|200px]]
 
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==Solution structure of phl p 3, a major allergen from timothy grass pollen==
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The line below this paragraph, containing "STRUCTURE_2jnz", creates the "Structure Box" on the page.
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<StructureSection load='2jnz' size='340' side='right'caption='[[2jnz]]' scene=''>
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You may change the PDB parameter (which sets the PDB file loaded into the applet)
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== Structural highlights ==
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or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
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<table><tr><td colspan='2'>[[2jnz]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Phleum_pratense Phleum pratense]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2JNZ OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2JNZ FirstGlance]. <br>
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or leave the SCENE parameter empty for the default display.
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Solution NMR</td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2jnz FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2jnz OCA], [https://pdbe.org/2jnz PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2jnz RCSB], [https://www.ebi.ac.uk/pdbsum/2jnz PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2jnz ProSAT]</span></td></tr>
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{{STRUCTURE_2jnz| PDB=2jnz | SCENE= }}
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</table>
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== Function ==
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[https://www.uniprot.org/uniprot/Q69B42_PHLPR Q69B42_PHLPR]
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== Evolutionary Conservation ==
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[[Image:Consurf_key_small.gif|200px|right]]
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Check<jmol>
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<jmolCheckbox>
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<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/jn/2jnz_consurf.spt"</scriptWhenChecked>
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<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
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<text>to colour the structure by Evolutionary Conservation</text>
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</jmolCheckbox>
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2jnz ConSurf].
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<div style="clear:both"></div>
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<div style="background-color:#fffaf0;">
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== Publication Abstract from PubMed ==
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The major 97-aa timothy grass (Phleum pratense) allergen Phl p 3 was recently isolated from an extract of timothy grass pollen. Sequence comparison classifies this protein as a group 3 allergen. The solution structure of Phl p 3 as determined by nuclear magnetic resonance spectroscopy reveals that the protein consists of a core of hydrophobic amino-acid side chains from two beta-sheets of five and four anti-parallel beta-strands, respectively. This conformation is very similar to the crystal structure published for Phl p 2 and strongly resembles the known conformation of the carboxy-terminal domain of Phl p 1, the major difference being the loop orientations. Phl p 2 and Phl p 3 show virtually identical immunoreactivity, and comparison of the charged surface amino acids of the two proteins gives initial clues as to the IgE recognition epitopes of these proteins.
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===Solution structure of phl p 3, a major allergen from timothy grass pollen===
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Solution structure of Phl p 3, a major allergen from timothy grass pollen.,Schweimer K, Petersen A, Suck R, Becker WM, Rosch P, Matecko I Biol Chem. 2008 Jul;389(7):919-23. PMID:18627309<ref>PMID:18627309</ref>
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From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
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</div>
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The line below this paragraph, {{ABSTRACT_PUBMED_18627309}}, adds the Publication Abstract to the page
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<div class="pdbe-citations 2jnz" style="background-color:#fffaf0;"></div>
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(as it appears on PubMed at http://www.pubmed.gov), where 18627309 is the PubMed ID number.
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== References ==
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<references/>
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{{ABSTRACT_PUBMED_18627309}}
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__TOC__
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</StructureSection>
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==About this Structure==
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[[Category: Large Structures]]
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2JNZ is a 1 chain structure of sequence from [http://en.wikipedia.org/wiki/Phleum_pratense Phleum pratense]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2JNZ OCA].
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==Reference==
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<ref group="xtra">PMID:18627309</ref><references group="xtra"/>
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[[Category: Phleum pratense]]
[[Category: Phleum pratense]]
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[[Category: Matecko, I.]]
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[[Category: Matecko I]]
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[[Category: Roesch, P.]]
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[[Category: Roesch P]]
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[[Category: Schweimer, K.]]
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[[Category: Schweimer K]]
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[[Category: Allergen]]
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[[Category: Timothy grass pollen]]
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Feb 16 23:59:24 2009''
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Current revision

Solution structure of phl p 3, a major allergen from timothy grass pollen

PDB ID 2jnz

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