1r88

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (12:11, 8 November 2023) (edit) (undo)
 
(9 intermediate revisions not shown.)
Line 1: Line 1:
-
{{Seed}}
 
-
[[Image:1r88.png|left|200px]]
 
-
<!--
+
==The crystal structure of Mycobacterium tuberculosis MPT51 (FbpC1)==
-
The line below this paragraph, containing "STRUCTURE_1r88", creates the "Structure Box" on the page.
+
<StructureSection load='1r88' size='340' side='right'caption='[[1r88]], [[Resolution|resolution]] 1.71&Aring;' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[1r88]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Mycobacterium_tuberculosis Mycobacterium tuberculosis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1R88 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1R88 FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.71&#8491;</td></tr>
-
-->
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1r88 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1r88 OCA], [https://pdbe.org/1r88 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1r88 RCSB], [https://www.ebi.ac.uk/pdbsum/1r88 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1r88 ProSAT]</span></td></tr>
-
{{STRUCTURE_1r88| PDB=1r88 | SCENE= }}
+
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/MPT51_MYCTU MPT51_MYCTU] May have a role in host tissue attachment, whereby ligands may include the serum protein fibronectin and small sugars.
 +
== Evolutionary Conservation ==
 +
[[Image:Consurf_key_small.gif|200px|right]]
 +
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/r8/1r88_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1r88 ConSurf].
 +
<div style="clear:both"></div>
 +
<div style="background-color:#fffaf0;">
 +
== Publication Abstract from PubMed ==
 +
Mycobacterium tuberculosis, the causative agent of tuberculosis, is known to secrete a number of highly immunogenic proteins that are thought to confer pathogenicity, in part, by mediating binding to host tissues. Among these secreted proteins are the trimeric antigen 85 (Ag85) complex and the related MPT51 protein, also known as FbpC1. While the physiological function of Ag85, a mycolyltransferase required for the biosynthesis of the cell wall component alpha,alpha'-trehalose dimycolate (or cord factor), has been identified recently, the function of the closely related MPT51 (approximately 40% identity with the Ag85 components) remains to be established. The crystal structure of M.tuberculosis MPT51, determined to 1.7 A resolution, shows that MPT51, like the Ag85 components Ag85B and Ag85C2, folds as an alpha/beta hydrolase, but it does not contain any of the catalytic elements required for mycolyltransferase activity. Moreover, the absence of a recognizable alpha,alpha'-trehalose monomycolate-binding site and the failure to detect an active site suggest that the function of MPT51 is of a non-enzymatic nature and that MPT51 may in fact represent a new family of non-catalytic alpha/beta hydrolases. Previous experimental evidence and the structural similarity to some integrins and carbohydrate-binding proteins led to the hypothesis that MPT51 might have a role in host tissue attachment, whereby ligands may include the serum protein fibronectin and small sugars.
-
===The crystal structure of Mycobacterium tuberculosis MPT51 (FbpC1)===
+
The structure of Mycobacterium tuberculosis MPT51 (FbpC1) defines a new family of non-catalytic alpha/beta hydrolases.,Wilson RA, Maughan WN, Kremer L, Besra GS, Futterer K J Mol Biol. 2004 Jan 9;335(2):519-30. PMID:14672660<ref>PMID:14672660</ref>
-
 
+
From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
-
<!--
+
</div>
-
The line below this paragraph, {{ABSTRACT_PUBMED_14672660}}, adds the Publication Abstract to the page
+
<div class="pdbe-citations 1r88" style="background-color:#fffaf0;"></div>
-
(as it appears on PubMed at http://www.pubmed.gov), where 14672660 is the PubMed ID number.
+
== References ==
-
-->
+
<references/>
-
{{ABSTRACT_PUBMED_14672660}}
+
__TOC__
-
 
+
</StructureSection>
-
==About this Structure==
+
[[Category: Large Structures]]
-
1R88 is a 2 chains structure of sequences from [http://en.wikipedia.org/wiki/Mycobacterium_tuberculosis Mycobacterium tuberculosis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1R88 OCA].
+
-
 
+
-
==Reference==
+
-
<ref group="xtra">PMID:14672660</ref><references group="xtra"/>
+
[[Category: Mycobacterium tuberculosis]]
[[Category: Mycobacterium tuberculosis]]
-
[[Category: Besra, G S.]]
+
[[Category: Besra GS]]
-
[[Category: Futterer, K.]]
+
[[Category: Futterer K]]
-
[[Category: Kremer, L.]]
+
[[Category: Kremer L]]
-
[[Category: Maughan, W N.]]
+
[[Category: Maughan WN]]
-
[[Category: Wilson, R A.]]
+
[[Category: Wilson RA]]
-
[[Category: Alfa/beta hydrolase fold]]
+
-
[[Category: Antigen 85]]
+
-
[[Category: Fbpc1]]
+
-
[[Category: Mpt51]]
+
-
[[Category: Mycobacterium tuberculosis]]
+
-
 
+
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Tue Feb 17 00:26:32 2009''
+

Current revision

The crystal structure of Mycobacterium tuberculosis MPT51 (FbpC1)

PDB ID 1r88

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools