1xvq

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (06:19, 3 April 2024) (edit) (undo)
 
(9 intermediate revisions not shown.)
Line 1: Line 1:
-
{{Seed}}
 
-
[[Image:1xvq.png|left|200px]]
 
-
<!--
+
==Crystal structure of thiol peroxidase from Mycobacterium tuberculosis==
-
The line below this paragraph, containing "STRUCTURE_1xvq", creates the "Structure Box" on the page.
+
<StructureSection load='1xvq' size='340' side='right'caption='[[1xvq]], [[Resolution|resolution]] 1.75&Aring;' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[1xvq]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Mycobacterium_tuberculosis Mycobacterium tuberculosis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1XVQ OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1XVQ FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.75&#8491;</td></tr>
-
-->
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CSX:S-OXY+CYSTEINE'>CSX</scene>, <scene name='pdbligand=NH4:AMMONIUM+ION'>NH4</scene>, <scene name='pdbligand=YT3:YTTRIUM+(III)+ION'>YT3</scene></td></tr>
-
{{STRUCTURE_1xvq| PDB=1xvq | SCENE= }}
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1xvq FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1xvq OCA], [https://pdbe.org/1xvq PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1xvq RCSB], [https://www.ebi.ac.uk/pdbsum/1xvq PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1xvq ProSAT]</span></td></tr>
 +
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/TPX_MYCTU TPX_MYCTU] Has antioxidant activity. Could remove peroxides or H(2)O(2) (By similarity).
 +
== Evolutionary Conservation ==
 +
[[Image:Consurf_key_small.gif|200px|right]]
 +
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/xv/1xvq_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1xvq ConSurf].
 +
<div style="clear:both"></div>
-
===Crystal structure of thiol peroxidase from Mycobacterium tuberculosis===
+
==See Also==
-
 
+
*[[Thiol peroxidase 3D structures|Thiol peroxidase 3D structures]]
-
 
+
__TOC__
-
<!--
+
</StructureSection>
-
The line below this paragraph, {{ABSTRACT_PUBMED_16884737}}, adds the Publication Abstract to the page
+
[[Category: Large Structures]]
-
(as it appears on PubMed at http://www.pubmed.gov), where 16884737 is the PubMed ID number.
+
-
-->
+
-
{{ABSTRACT_PUBMED_16884737}}
+
-
 
+
-
==About this Structure==
+
-
1XVQ is a 1 chain structure of sequence from [http://en.wikipedia.org/wiki/Mycobacterium_tuberculosis Mycobacterium tuberculosis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1XVQ OCA].
+
-
 
+
-
==Reference==
+
-
<ref group="xtra">PMID:16884737</ref><references group="xtra"/>
+
[[Category: Mycobacterium tuberculosis]]
[[Category: Mycobacterium tuberculosis]]
-
[[Category: Holton, J M.]]
+
[[Category: Holton JM]]
-
[[Category: Hung, L W.]]
+
[[Category: Hung LW]]
-
[[Category: Kim, S I.]]
+
[[Category: Kim SI]]
-
[[Category: Park, M S.]]
+
[[Category: Park MS]]
-
[[Category: Pedelacq, J D.]]
+
[[Category: Pedelacq JD]]
-
[[Category: Rho, B S.]]
+
[[Category: Rho BS]]
-
[[Category: TBSGC, TB Structural Genomics Consortium.]]
+
[[Category: Terwilliger TC]]
-
[[Category: Terwilliger, T C.]]
+
[[Category: Vigil D]]
-
[[Category: Vigil, D.]]
+
-
[[Category: Protein structure initiative]]
+
-
[[Category: Psi]]
+
-
[[Category: Structural genomic]]
+
-
[[Category: Tb structural genomics consortium]]
+
-
[[Category: Tbsgc]]
+
-
[[Category: Thioredoxin fold]]
+
-
 
+
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Tue Feb 17 00:28:12 2009''
+

Current revision

Crystal structure of thiol peroxidase from Mycobacterium tuberculosis

PDB ID 1xvq

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools