1jhd

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (07:39, 7 February 2024) (edit) (undo)
 
(9 intermediate revisions not shown.)
Line 1: Line 1:
-
{{Seed}}
 
-
[[Image:1jhd.png|left|200px]]
 
-
<!--
+
==Crystal Structure of Bacterial ATP Sulfurylase from the Riftia pachyptila Symbiont==
-
The line below this paragraph, containing "STRUCTURE_1jhd", creates the "Structure Box" on the page.
+
<StructureSection load='1jhd' size='340' side='right'caption='[[1jhd]], [[Resolution|resolution]] 1.70&Aring;' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[1jhd]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Sulfur-oxidizing_endosymbiont_of_Riftia_pachyptila Sulfur-oxidizing endosymbiont of Riftia pachyptila]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1JHD OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1JHD FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.7&#8491;</td></tr>
-
-->
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=BR:BROMIDE+ION'>BR</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
-
{{STRUCTURE_1jhd| PDB=1jhd | SCENE= }}
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1jhd FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1jhd OCA], [https://pdbe.org/1jhd PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1jhd RCSB], [https://www.ebi.ac.uk/pdbsum/1jhd PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1jhd ProSAT]</span></td></tr>
-
 
+
</table>
-
===Crystal Structure of Bacterial ATP Sulfurylase from the Riftia pachyptila Symbiont===
+
== Function ==
-
 
+
[https://www.uniprot.org/uniprot/SAT_RIFPS SAT_RIFPS]
-
 
+
== Evolutionary Conservation ==
-
<!--
+
[[Image:Consurf_key_small.gif|200px|right]]
-
The line below this paragraph, {{ABSTRACT_PUBMED_11724564}}, adds the Publication Abstract to the page
+
Check<jmol>
-
(as it appears on PubMed at http://www.pubmed.gov), where 11724564 is the PubMed ID number.
+
<jmolCheckbox>
-
-->
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/jh/1jhd_consurf.spt"</scriptWhenChecked>
-
{{ABSTRACT_PUBMED_11724564}}
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
-
 
+
<text>to colour the structure by Evolutionary Conservation</text>
-
==About this Structure==
+
</jmolCheckbox>
-
1JHD is a 1 chain structure of sequence from [http://en.wikipedia.org/wiki/Bacteria Bacteria]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1JHD OCA].
+
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1jhd ConSurf].
-
 
+
<div style="clear:both"></div>
-
==Reference==
+
__TOC__
-
<ref group="xtra">PMID:11724564</ref><references group="xtra"/>
+
</StructureSection>
-
[[Category: Bacteria]]
+
[[Category: Large Structures]]
-
[[Category: Sulfate adenylyltransferase]]
+
[[Category: Sulfur-oxidizing endosymbiont of Riftia pachyptila]]
-
[[Category: Beynon, J D.]]
+
[[Category: Beynon JD]]
-
[[Category: Fisher, A J.]]
+
[[Category: Fisher AJ]]
-
[[Category: Huston, S L.]]
+
[[Category: Huston SL]]
-
[[Category: MacRae, I J.]]
+
[[Category: MacRae IJ]]
-
[[Category: Nelson, D C.]]
+
[[Category: Nelson DC]]
-
[[Category: Segel, I H.]]
+
[[Category: Segel IH]]
-
[[Category: Adenylyl transferase]]
+
-
[[Category: Ap]]
+
-
[[Category: Bromide]]
+
-
[[Category: Chemoautotroph]]
+
-
[[Category: Sulfurylase]]
+
-
 
+
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Tue Feb 17 02:18:17 2009''
+

Current revision

Crystal Structure of Bacterial ATP Sulfurylase from the Riftia pachyptila Symbiont

PDB ID 1jhd

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools