This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


1crz

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (15:42, 13 March 2024) (edit) (undo)
 
(11 intermediate revisions not shown.)
Line 1: Line 1:
-
{{Seed}}
 
-
[[Image:1crz.png|left|200px]]
 
-
<!--
+
==CRYSTAL STRUCTURE OF THE E. COLI TOLB PROTEIN==
-
The line below this paragraph, containing "STRUCTURE_1crz", creates the "Structure Box" on the page.
+
<StructureSection load='1crz' size='340' side='right'caption='[[1crz]], [[Resolution|resolution]] 1.95&Aring;' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[1crz]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1CRZ OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1CRZ FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.95&#8491;</td></tr>
-
-->
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
-
{{STRUCTURE_1crz| PDB=1crz | SCENE= }}
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1crz FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1crz OCA], [https://pdbe.org/1crz PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1crz RCSB], [https://www.ebi.ac.uk/pdbsum/1crz PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1crz ProSAT]</span></td></tr>
 +
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/TOLB_ECOLI TOLB_ECOLI] Involved in the TonB-independent uptake of group A colicins (colicins A, E1, E2, E3 and K). Necessary for the colicins to reach their respective targets after initial binding to the bacteria.[HAMAP-Rule:MF_00671]
 +
== Evolutionary Conservation ==
 +
[[Image:Consurf_key_small.gif|200px|right]]
 +
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/cr/1crz_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1crz ConSurf].
 +
<div style="clear:both"></div>
-
===CRYSTAL STRUCTURE OF THE E. COLI TOLB PROTEIN===
+
==See Also==
-
 
+
*[[TolB|TolB]]
-
 
+
__TOC__
-
<!--
+
</StructureSection>
-
The line below this paragraph, {{ABSTRACT_PUBMED_10545334}}, adds the Publication Abstract to the page
+
-
(as it appears on PubMed at http://www.pubmed.gov), where 10545334 is the PubMed ID number.
+
-
-->
+
-
{{ABSTRACT_PUBMED_10545334}}
+
-
 
+
-
==About this Structure==
+
-
1CRZ is a 1 chain structure of sequence from [http://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1CRZ OCA].
+
-
 
+
-
==Reference==
+
-
<ref group="xtra">PMID:10545334</ref><references group="xtra"/>
+
[[Category: Escherichia coli]]
[[Category: Escherichia coli]]
-
[[Category: Abergel, C.]]
+
[[Category: Large Structures]]
-
[[Category: Benedetti, H.]]
+
[[Category: Abergel C]]
-
[[Category: Bouveret, E.]]
+
[[Category: Benedetti H]]
-
[[Category: Brown, K.]]
+
[[Category: Bouveret E]]
-
[[Category: Claverie, J-M.]]
+
[[Category: Brown K]]
-
[[Category: Lazdunski, C.]]
+
[[Category: Claverie J-M]]
-
[[Category: Rigal, A.]]
+
[[Category: Lazdunski C]]
-
[[Category: Two domains: beta propeller and alpha/beta fold]]
+
[[Category: Rigal A]]
-
 
+
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Tue Feb 17 02:19:15 2009''
+

Current revision

CRYSTAL STRUCTURE OF THE E. COLI TOLB PROTEIN

PDB ID 1crz

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools