This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.

Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


1h4j

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (11:27, 27 March 2024) (edit) (undo)
 
(11 intermediate revisions not shown.)
Line 1: Line 1:
-
{{Seed}}
 
-
[[Image:1h4j.png|left|200px]]
 
-
<!--
+
==Methylobacterium extorquens methanol dehydrogenase D303E mutant==
-
The line below this paragraph, containing "STRUCTURE_1h4j", creates the "Structure Box" on the page.
+
<StructureSection load='1h4j' size='340' side='right'caption='[[1h4j]], [[Resolution|resolution]] 3.00&Aring;' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[1h4j]] is a 8 chain structure with sequence from [https://en.wikipedia.org/wiki/Methylorubrum_extorquens Methylorubrum extorquens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1H4J OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1H4J FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 3&#8491;</td></tr>
-
-->
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=PQQ:PYRROLOQUINOLINE+QUINONE'>PQQ</scene></td></tr>
-
{{STRUCTURE_1h4j| PDB=1h4j | SCENE= }}
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1h4j FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1h4j OCA], [https://pdbe.org/1h4j PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1h4j RCSB], [https://www.ebi.ac.uk/pdbsum/1h4j PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1h4j ProSAT]</span></td></tr>
 +
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/DHM1_METEA DHM1_METEA] Catalyzes the oxidation of primary alcohols including methanol.
 +
== Evolutionary Conservation ==
 +
[[Image:Consurf_key_small.gif|200px|right]]
 +
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/h4/1h4j_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1h4j ConSurf].
 +
<div style="clear:both"></div>
-
===METHYLOBACTERIUM EXTORQUENS METHANOL DEHYDROGENASE D303E MUTANT===
+
==See Also==
-
 
+
*[[Methanol dehydrogenase|Methanol dehydrogenase]]
-
 
+
__TOC__
-
<!--
+
</StructureSection>
-
The line below this paragraph, {{ABSTRACT_PUBMED_11502173}}, adds the Publication Abstract to the page
+
[[Category: Large Structures]]
-
(as it appears on PubMed at http://www.pubmed.gov), where 11502173 is the PubMed ID number.
+
[[Category: Methylorubrum extorquens]]
-
-->
+
[[Category: Afolabi PR]]
-
{{ABSTRACT_PUBMED_11502173}}
+
[[Category: Anthony C]]
-
 
+
[[Category: Cooper JB]]
-
==About this Structure==
+
[[Category: Gill R]]
-
1H4J is a 8 chains structure of sequences from [http://en.wikipedia.org/wiki/Methylobacterium_extorquens Methylobacterium extorquens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1H4J OCA].
+
[[Category: Mohammed F]]
-
 
+
[[Category: Thompson D]]
-
==Reference==
+
[[Category: Wood SP]]
-
<ref group="xtra">PMID:11502173</ref><references group="xtra"/>
+
-
[[Category: Methylobacterium extorquens]]
+
-
[[Category: Afolabi, P R.]]
+
-
[[Category: Anthony, C.]]
+
-
[[Category: Cooper, J B.]]
+
-
[[Category: Gill, R.]]
+
-
[[Category: Mohammed, F.]]
+
-
[[Category: Thompson, D.]]
+
-
[[Category: Wood, S P.]]
+
-
[[Category: Dehydrogenase]]
+
-
[[Category: Quinoprotein]]
+
-
 
+
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Tue Feb 17 02:39:13 2009''
+

Current revision

Methylobacterium extorquens methanol dehydrogenase D303E mutant

PDB ID 1h4j

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/1h4j"
Personal tools