This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


1ci9

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (05:57, 3 April 2024) (edit) (undo)
 
(12 intermediate revisions not shown.)
Line 1: Line 1:
-
{{Seed}}
 
-
[[Image:1ci9.png|left|200px]]
 
-
<!--
+
==DFP-INHIBITED ESTERASE ESTB FROM BURKHOLDERIA GLADIOLI==
-
The line below this paragraph, containing "STRUCTURE_1ci9", creates the "Structure Box" on the page.
+
<StructureSection load='1ci9' size='340' side='right'caption='[[1ci9]], [[Resolution|resolution]] 1.80&Aring;' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[1ci9]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Burkholderia_gladioli Burkholderia gladioli]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1CI9 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1CI9 FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.8&#8491;</td></tr>
-
-->
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=DFP:DIISOPROPYL+PHOSPHONATE'>DFP</scene></td></tr>
-
{{STRUCTURE_1ci9| PDB=1ci9 | SCENE= }}
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1ci9 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1ci9 OCA], [https://pdbe.org/1ci9 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1ci9 RCSB], [https://www.ebi.ac.uk/pdbsum/1ci9 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1ci9 ProSAT]</span></td></tr>
 +
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/ESTB_BURGA ESTB_BURGA] Acts on short-chain (C4-C6) fatty acid esters and triglycerides, including tertiary alcohol esters. Activity on p-nitrophenyl esters is generally higher than on o-nitrophenyl esters. Lacks beta-lactamase activity; it hydrolyzes the ester bond of cephalosporin substrates but there is no opening of the beta-lactam ring observed.
 +
== Evolutionary Conservation ==
 +
[[Image:Consurf_key_small.gif|200px|right]]
 +
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ci/1ci9_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1ci9 ConSurf].
 +
<div style="clear:both"></div>
-
===DFP-INHIBITED ESTERASE ESTB FROM BURKHOLDERIA GLADIOLI===
+
==See Also==
-
 
+
*[[Carboxylesterase 3D structures|Carboxylesterase 3D structures]]
-
 
+
__TOC__
-
<!--
+
</StructureSection>
-
The line below this paragraph, {{ABSTRACT_PUBMED_11847270}}, adds the Publication Abstract to the page
+
-
(as it appears on PubMed at http://www.pubmed.gov), where 11847270 is the PubMed ID number.
+
-
-->
+
-
{{ABSTRACT_PUBMED_11847270}}
+
-
 
+
-
==About this Structure==
+
-
1CI9 is a 2 chains structure of sequences from [http://en.wikipedia.org/wiki/Burkholderia_gladioli Burkholderia gladioli]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1CI9 OCA].
+
-
 
+
-
==Reference==
+
-
<ref group="xtra">PMID:11847270</ref><references group="xtra"/>
+
[[Category: Burkholderia gladioli]]
[[Category: Burkholderia gladioli]]
-
[[Category: Carboxylesterase]]
+
[[Category: Large Structures]]
-
[[Category: Kratky, C.]]
+
[[Category: Kratky C]]
-
[[Category: Petersen, E I.]]
+
[[Category: Petersen EI]]
-
[[Category: Schwab, H.]]
+
[[Category: Schwab H]]
-
[[Category: Wagner, U G.]]
+
[[Category: Wagner UG]]
-
[[Category: Caboxylesterase]]
+
-
[[Category: Hydrolase]]
+
-
 
+
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Tue Feb 17 02:46:33 2009''
+

Current revision

DFP-INHIBITED ESTERASE ESTB FROM BURKHOLDERIA GLADIOLI

PDB ID 1ci9

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools