This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


2imq

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (10:13, 30 August 2023) (edit) (undo)
 
(9 intermediate revisions not shown.)
Line 1: Line 1:
-
{{Seed}}
 
-
[[Image:2imq.png|left|200px]]
 
-
<!--
+
==Crystal structure of ferrous cimex nitrophorin==
-
The line below this paragraph, containing "STRUCTURE_2imq", creates the "Structure Box" on the page.
+
<StructureSection load='2imq' size='340' side='right'caption='[[2imq]], [[Resolution|resolution]] 1.30&Aring;' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[2imq]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Cimex_lectularius Cimex lectularius]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2IMQ OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2IMQ FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.3&#8491;</td></tr>
-
-->
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=HEM:PROTOPORPHYRIN+IX+CONTAINING+FE'>HEM</scene></td></tr>
-
{{STRUCTURE_2imq| PDB=2imq | SCENE= }}
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2imq FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2imq OCA], [https://pdbe.org/2imq PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2imq RCSB], [https://www.ebi.ac.uk/pdbsum/2imq PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2imq ProSAT]</span></td></tr>
 +
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/NP_CIMLE NP_CIMLE] Heme-based protein that delivers nitric oxide gas (NO) to the victim while feeding, resulting in vasodilation (Probable). In place of heme, the heme-binding cysteine can also reversibly bind NO when it is present in high concentrations (PubMed:15637157).<ref>PMID:15637157</ref>
 +
== Evolutionary Conservation ==
 +
[[Image:Consurf_key_small.gif|200px|right]]
 +
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/im/2imq_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2imq ConSurf].
 +
<div style="clear:both"></div>
-
===Crystal structure of ferrous cimex nitrophorin===
+
==See Also==
-
 
+
*[[Nitrophorin|Nitrophorin]]
-
 
+
== References ==
-
==About this Structure==
+
<references/>
-
2IMQ is a 1 chain structure of sequence from [http://en.wikipedia.org/wiki/Cimex_lectularius Cimex lectularius]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2IMQ OCA].
+
__TOC__
-
 
+
</StructureSection>
-
==Reference==
+
-
<ref group="xtra">PMID:15637157</ref><references group="xtra"/>
+
[[Category: Cimex lectularius]]
[[Category: Cimex lectularius]]
-
[[Category: Montfort, W R.]]
+
[[Category: Large Structures]]
-
[[Category: Weichsel, A.]]
+
[[Category: Montfort WR]]
-
[[Category: Beta-sandwich]]
+
[[Category: Weichsel A]]
-
[[Category: Ferrous heme]]
+
-
[[Category: Transport protein]]
+
-
 
+
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Tue Feb 17 04:11:59 2009''
+

Current revision

Crystal structure of ferrous cimex nitrophorin

PDB ID 2imq

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools