This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


1jc6

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (07:50, 3 April 2024) (edit) (undo)
 
(9 intermediate revisions not shown.)
Line 1: Line 1:
-
{{Seed}}
 
-
[[Image:1jc6.png|left|200px]]
 
-
<!--
+
==SOLUTION STRUCTURE OF BUNGARUS FACIATUS IX, A KUNITZ-TYPE CHYMOTRYPSIN INHIBITOR==
-
The line below this paragraph, containing "STRUCTURE_1jc6", creates the "Structure Box" on the page.
+
<StructureSection load='1jc6' size='340' side='right'caption='[[1jc6]]' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[1jc6]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Bungarus_fasciatus Bungarus fasciatus]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1JC6 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1JC6 FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Solution NMR</td></tr>
-
-->
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1jc6 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1jc6 OCA], [https://pdbe.org/1jc6 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1jc6 RCSB], [https://www.ebi.ac.uk/pdbsum/1jc6 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1jc6 ProSAT]</span></td></tr>
-
{{STRUCTURE_1jc6| PDB=1jc6 | SCENE= }}
+
</table>
-
 
+
== Function ==
-
===SOLUTION STRUCTURE OF BUNGARUS FACIATUS IX, A KUNITZ-TYPE CHYMOTRYPSIN INHIBITOR===
+
[https://www.uniprot.org/uniprot/VKT9_BUNFA VKT9_BUNFA] Dual-function toxin that inhibits both serine proteases (high activity on chymotrypsin (Ki = 18 nM), and low activity on elastase) and voltage-gated potassium channels Kv1.3/KCNA3 (IC(50) = 120.0 nM).<ref>PMID:11562364</ref> <ref>PMID:24243656</ref>
-
 
+
== Evolutionary Conservation ==
-
 
+
[[Image:Consurf_key_small.gif|200px|right]]
-
<!--
+
Check<jmol>
-
The line below this paragraph, {{ABSTRACT_PUBMED_11562364}}, adds the Publication Abstract to the page
+
<jmolCheckbox>
-
(as it appears on PubMed at http://www.pubmed.gov), where 11562364 is the PubMed ID number.
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/jc/1jc6_consurf.spt"</scriptWhenChecked>
-
-->
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
-
{{ABSTRACT_PUBMED_11562364}}
+
<text>to colour the structure by Evolutionary Conservation</text>
-
 
+
</jmolCheckbox>
-
==About this Structure==
+
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1jc6 ConSurf].
-
1JC6 is a 1 chain structure of sequence from [http://en.wikipedia.org/wiki/Bungarus_fasciatus Bungarus fasciatus]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1JC6 OCA].
+
<div style="clear:both"></div>
-
 
+
== References ==
-
==Reference==
+
<references/>
-
<ref group="xtra">PMID:11562364</ref><references group="xtra"/>
+
__TOC__
 +
</StructureSection>
[[Category: Bungarus fasciatus]]
[[Category: Bungarus fasciatus]]
-
[[Category: Chen, C.]]
+
[[Category: Large Structures]]
-
[[Category: Chiou, S H.]]
+
[[Category: Chen C]]
-
[[Category: Hsu, C H.]]
+
[[Category: Chiou SH]]
-
[[Category: Su, N Y.]]
+
[[Category: Hsu CH]]
-
[[Category: Wu, S H.]]
+
[[Category: Su NY]]
-
[[Category: Bf ix]]
+
[[Category: Wu SH]]
-
[[Category: Chymotrypsin inhibitor]]
+
-
[[Category: Kunitz inhibitor]]
+
-
[[Category: Neurotoxin]]
+
-
[[Category: Nmr]]
+
-
[[Category: Protease inhibitor]]
+
-
[[Category: Snake venom]]
+
-
[[Category: Solution structure]]
+
-
 
+
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Tue Feb 17 04:26:16 2009''
+

Current revision

SOLUTION STRUCTURE OF BUNGARUS FACIATUS IX, A KUNITZ-TYPE CHYMOTRYPSIN INHIBITOR

PDB ID 1jc6

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools