2zpc

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{{Seed}}
 
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[[Image:2zpc.png|left|200px]]
 
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==Crystal structure of the R43L mutant of LolA in the closed form==
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The line below this paragraph, containing "STRUCTURE_2zpc", creates the "Structure Box" on the page.
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<StructureSection load='2zpc' size='340' side='right'caption='[[2zpc]], [[Resolution|resolution]] 2.35&Aring;' scene=''>
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You may change the PDB parameter (which sets the PDB file loaded into the applet)
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== Structural highlights ==
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or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
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<table><tr><td colspan='2'>[[2zpc]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Escherichia_coli_K-12 Escherichia coli K-12]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2ZPC OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2ZPC FirstGlance]. <br>
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or leave the SCENE parameter empty for the default display.
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.35&#8491;</td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2zpc FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2zpc OCA], [https://pdbe.org/2zpc PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2zpc RCSB], [https://www.ebi.ac.uk/pdbsum/2zpc PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2zpc ProSAT]</span></td></tr>
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{{STRUCTURE_2zpc| PDB=2zpc | SCENE= }}
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</table>
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== Function ==
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[https://www.uniprot.org/uniprot/LOLA_ECOLI LOLA_ECOLI] Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane); the inner membrane retention signal functions at the release step.<ref>PMID:11758943</ref> May act as a regulator of the RCS-phosphorelay signal transduction pathway.<ref>PMID:11758943</ref>
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== Evolutionary Conservation ==
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[[Image:Consurf_key_small.gif|200px|right]]
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Check<jmol>
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<jmolCheckbox>
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<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/zp/2zpc_consurf.spt"</scriptWhenChecked>
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<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
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<text>to colour the structure by Evolutionary Conservation</text>
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</jmolCheckbox>
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2zpc ConSurf].
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<div style="clear:both"></div>
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<div style="background-color:#fffaf0;">
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== Publication Abstract from PubMed ==
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Outer membrane-specific lipoproteins of Escherichia coli are released from the inner membrane through the action of Lol-CDE, which leads to the formation of a complex between the lipoprotein and LolA, a periplasmic chaperone. LolA then transfers lipoproteins to LolB, a receptor in the outer membrane. The structures of LolA and LolB are very similar, having an incomplete beta-barrel covered with an alpha-helical lid forming a hydrophobic cavity inside. The cavity of LolA, but not that of LolB, is closed and thus inaccessible to the bulk solvent. Previous studies suggested that Arg at position 43 of LolA is critical for maintaining this closed structure. We show here, through a crystallographic study, that the cavity of the LolA(R43L) mutant, in which Leu replaces Arg-43, is indeed open to the external milieu. We then found that the binding of a fluorescence probe distinguishes the open/close state of the cavity. Furthermore, it was revealed that the hydrophobic cavity of LolA opens upon the binding of lipoproteins. Such a liganded LolA was found to be inactive in the release of lipoproteins from the inner membrane. On the other hand, the liganded LolA became fully functional when lipoproteins were removed from LolA by detergent treatment or transferred to LolB. Free LolA thus formed was inaccessible to a fluorescence probe. These results, taken together, reveal the LolA cycle, in which the hydrophobic cavity undergoes opening and closing upon the binding and release of lipoproteins, respectively.
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===Crystal structure of the R43L mutant of LolA in the closed form===
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Opening and closing of the hydrophobic cavity of LolA coupled to lipoprotein binding and release.,Oguchi Y, Takeda K, Watanabe S, Yokota N, Miki K, Tokuda H J Biol Chem. 2008 Sep 12;283(37):25414-20. Epub 2008 Jul 9. PMID:18617521<ref>PMID:18617521</ref>
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From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
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</div>
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The line below this paragraph, {{ABSTRACT_PUBMED_18617521}}, adds the Publication Abstract to the page
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<div class="pdbe-citations 2zpc" style="background-color:#fffaf0;"></div>
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(as it appears on PubMed at http://www.pubmed.gov), where 18617521 is the PubMed ID number.
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== References ==
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<references/>
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{{ABSTRACT_PUBMED_18617521}}
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__TOC__
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</StructureSection>
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==About this Structure==
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[[Category: Escherichia coli K-12]]
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2ZPC is a 1 chain structure of sequence from [http://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2ZPC OCA].
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[[Category: Large Structures]]
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[[Category: Miki K]]
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==Reference==
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[[Category: Oguchi Y]]
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<ref group="xtra">PMID:18617521</ref><references group="xtra"/>
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[[Category: Takeda K]]
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[[Category: Escherichia coli]]
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[[Category: Tokuda H]]
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[[Category: Miki, K.]]
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[[Category: Yokota N]]
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[[Category: Oguchi, Y.]]
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[[Category: Takeda, K.]]
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[[Category: Tokuda, H.]]
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[[Category: Yokota, N.]]
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[[Category: Chaperone]]
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[[Category: Periplasm]]
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[[Category: Protein transport]]
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[[Category: Transport]]
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[[Category: Unclosed beta barrel]]
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Tue Feb 17 05:02:45 2009''
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Current revision

Crystal structure of the R43L mutant of LolA in the closed form

PDB ID 2zpc

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