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Template:STRUCTURE 1myp

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Current revision

1myp, resolution 3.00Å ()

Ligands:

, ,

Activity:

Peroxidase, with EC number 1.11.1.7

Structural annotation:
Resources:	CATH : 1Mypc00, 1Mypd00 InterPro : Ipr019794, Ipr019791, Ipr010255, Ipr002007, Ipr019793 Pfam : PF03098 SCOP : d1myp.1, d1myp.2 UniProt : P05164

Evolutionary conservation:

Toggle Conservation Colors:

Rows = identical sequences:

Further Information:

Caveats,

Explanation,
Complete Results at ConSurfDB

Resources:

FirstGlance, OCA, RCSB, PDBsum

Coordinates:

save as pdb, mmCIF, xml

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/Template:STRUCTURE_1myp"

@@ Line 1: / Line 1: @@
 {{Structure
-|PDB= {{{PDB}}}|SCENE={{{SCENE|}}}|SIZE={{{SIZE|350}}}|CAPTION={{{CAPTION|[[1myp]], resolution 3.00&Aring; (<scene name='initialview01'>default scene</scene>)}}}
+|PDB= {{{PDB}}}|SCENE={{{SCENE|}}}|SIZE={{{SIZE|350}}}|CAPTION={{{CAPTION|[[1myp]], [[Resolution|resolution]] 3.00&Aring; (<scene name='initialview01'>default scene</scene>)}}}
-|LIGAND= <scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=HEM:PROTOPORPHYRIN+IX+CONTAINING+FE'>HEM</scene>
+|LIGAND= <scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=HEM:PROTOPORPHYRIN+IX+CONTAINING+FE'>HEM</scene>, <scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene>
 |ACTIVITY= <span class='plainlinks'>[http://en.wikipedia.org/wiki/Peroxidase Peroxidase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.11.1.7 1.11.1.7] </span>
-|DOMAIN=<span class='plainlinks'>[http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=pfam03098 An_peroxidase]</span>
+|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1myp FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1myp OCA], [http://www.rcsb.org/pdb/explore.do?structureId=1myp RCSB], [http://www.ebi.ac.uk/pdbsum/1myp PDBsum]</span>
-|NONSTDRES=<scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene>
+|SARESOURCES=<span class='plainlinks'>CATH : [http://www.cathdb.info/domain/1mypC00 1Mypc00], [http://www.cathdb.info/domain/1mypD00 1Mypd00]<br>InterPro : [http://www.ebi.ac.uk/interpro/ISearch?query=IPR019794 Ipr019794], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR019791 Ipr019791], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR010255 Ipr010255], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR002007 Ipr002007], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR019793 Ipr019793]<br>Pfam : [http://pfam.sanger.ac.uk/family?acc=PF03098 PF03098]<br>SCOP : [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&amp;key=18701 d1myp.1], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&amp;key=18702 d1myp.2]<br>UniProt : [http://www.uniprot.org/uniprot/P05164 P05164]</span>
-|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1myp FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1myp OCA], [http://www.ebi.ac.uk/pdbsum/1myp PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=1myp RCSB]</span>
+|uPDB=1MYP|CONSURF={{!}}-
-|FUNCTION={{GO|id=GO:0003682 | text = chromatin binding}}{{GO|id=GO:0016491 | text = oxidoreductase activity}}{{GO|id=GO:0005509 | text = calcium ion binding}}{{GO|id=GO:0005506 | text = iron ion binding}}{{GO|id=GO:0020037 | text = heme binding}}{{GO|id=GO:0046872 | text = metal ion binding}}{{GO|id=GO:0004601 | text = peroxidase activity}}
-|PROCESS={{GO|id=GO:0006979 | text = response to oxidative stress}}{{GO|id=GO:0042744 | text = hydrogen peroxide catabolic process}}{{GO|id=GO:0006952 | text = defense response}}{{GO|id=GO:0006118 | text = electron transport}}{{GO|id=GO:0006916 | text = anti-apoptosis}}
-|COMPONENT={{GO|id=GO:0005764 | text = lysosome}}{{GO|id=GO:0005634 | text = nucleus}}
-|SARESOURCES=<span class='plainlinks'>CATH : [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1mypC00 1Mypc00], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1mypD00 1Mypd00]<br>InterPro : [http://www.ebi.ac.uk/interpro/ISearch?query=IPR002016 Ipr002016], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR010255 Ipr010255], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR002007 Ipr002007]<br>Pfam : [http://pfam.sanger.ac.uk/family?acc=PF03098 PF03098]<br>SCOP : [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&amp;key=18701 d1myp.1], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&amp;key=18702 d1myp.2]<br>UniProt : [http://ca.expasy.org/cgi-bin/niceprot.pl?P05164 P05164]</span>
-|CONSURF={{!}}-
 {{!}} colspan="2" style="background-color:#bac9f7;color:#040d44;vertical-align:top;text-align:left;" {{!}} [[Image:Consurf_key_small.gif|center]]
 {{!}}-{{!}} style="background-color:#bac9f7;color:#040d44;vertical-align:top;text-align:left;"
@@ Line 29: / Line 24: @@
 <jmolButton>
 <script></script>
-<text>C [x]</text>
+<text>B [x]</text>
-<name>jmb_1myp_C</name>
+<name>jmb_1myp_B</name>
-<title>toggle chain C</title>
+<title>toggle chain B</title>
 <jsscript>ConsurfChainButton(elementClicked)</jsscript>
 <appendtargetsuffixtoid>true</appendtargetsuffixtoid>
@@ Line 40: / Line 35: @@
 <jmolButton>
 <script></script>
-<text>B [x]</text>
+<text>C [x]</text>
-<name>jmb_1myp_B</name>
+<name>jmb_1myp_C</name>
-<title>toggle chain B</title>
+<title>toggle chain C</title>
 <jsscript>ConsurfChainButton(elementClicked)</jsscript>
 <appendtargetsuffixtoid>true</appendtargetsuffixtoid>

Template:STRUCTURE 1myp

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