2apf

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
(New page: 200px<br /><applet load="2apf" size="450" color="white" frame="true" align="right" spinBox="true" caption="2apf, resolution 1.80&Aring;" /> '''Crystal Structure of...)
Current revision (07:50, 30 October 2024) (edit) (undo)
 
(16 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:2apf.gif|left|200px]]<br /><applet load="2apf" size="450" color="white" frame="true" align="right" spinBox="true"
 
-
caption="2apf, resolution 1.80&Aring;" />
 
-
'''Crystal Structure of the A52V/S54N/K66E variant of the murine T cell receptor V beta 8.2 domain'''<br />
 
-
==About this Structure==
+
==Crystal Structure of the A52V/S54N/K66E variant of the murine T cell receptor V beta 8.2 domain==
-
2APF is a [http://en.wikipedia.org/wiki/Protein_complex Protein complex] structure of sequences from [http://en.wikipedia.org/wiki/Rattus_norvegicus Rattus norvegicus] with MLA as [http://en.wikipedia.org/wiki/ligand ligand]. Full crystallographic information is available from [http://ispc.weizmann.ac.il/oca-bin/ocashort?id=2APF OCA].
+
<StructureSection load='2apf' size='340' side='right'caption='[[2apf]], [[Resolution|resolution]] 1.80&Aring;' scene=''>
 +
== Structural highlights ==
 +
<table><tr><td colspan='2'>[[2apf]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Rattus_norvegicus Rattus norvegicus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2APF OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2APF FirstGlance]. <br>
 +
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.8&#8491;</td></tr>
 +
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MLA:MALONIC+ACID'>MLA</scene></td></tr>
 +
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2apf FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2apf OCA], [https://pdbe.org/2apf PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2apf RCSB], [https://www.ebi.ac.uk/pdbsum/2apf PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2apf ProSAT]</span></td></tr>
 +
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/A2NAI0_RAT A2NAI0_RAT]
 +
== Evolutionary Conservation ==
 +
[[Image:Consurf_key_small.gif|200px|right]]
 +
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ap/2apf_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2apf ConSurf].
 +
<div style="clear:both"></div>
-
==Reference==
+
==See Also==
-
The nitty-gritty of protein interactions., Schreiber G, Structure. 2005 Dec;13(12):1737-8. PMID:[http://ispc.weizmann.ac.il//pmbin/getpm?pmid=16338399 16338399]
+
*[[T-cell receptor 3D structures|T-cell receptor 3D structures]]
-
[[Category: Protein complex]]
+
__TOC__
 +
</StructureSection>
 +
[[Category: Large Structures]]
[[Category: Rattus norvegicus]]
[[Category: Rattus norvegicus]]
-
[[Category: Cho, S.]]
+
[[Category: Cho S]]
-
[[Category: Guan, R.]]
+
[[Category: Guan R]]
-
[[Category: Kerzic, M.C.]]
+
[[Category: Kerzic MC]]
-
[[Category: Kieke, M.C.]]
+
[[Category: Kieke MC]]
-
[[Category: Kranz, D.M.]]
+
[[Category: Kranz DM]]
-
[[Category: Mariuzza, R.A.]]
+
[[Category: Mariuzza RA]]
-
[[Category: Sundberg, E.J.]]
+
[[Category: Sundberg EJ]]
-
[[Category: Swaminathan, C.P.]]
+
[[Category: Swaminathan CP]]
-
[[Category: Yang, J.]]
+
[[Category: Yang J]]
-
[[Category: MLA]]
+
-
[[Category: t cell receptor]]
+
-
 
+
-
''Page seeded by [http://ispc.weizmann.ac.il/oca OCA ] on Wed Nov 21 08:16:20 2007''
+

Current revision

Crystal Structure of the A52V/S54N/K66E variant of the murine T cell receptor V beta 8.2 domain

PDB ID 2apf

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/2apf"
Personal tools