This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


2v3g

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (15:04, 13 December 2023) (edit) (undo)
 
(9 intermediate revisions not shown.)
Line 1: Line 1:
-
{{Seed}}
 
-
[[Image:2v3g.png|left|200px]]
 
-
<!--
+
==Structure of a family 26 lichenase in complex with noeuromycin==
-
The line below this paragraph, containing "STRUCTURE_2v3g", creates the "Structure Box" on the page.
+
<StructureSection load='2v3g' size='340' side='right'caption='[[2v3g]], [[Resolution|resolution]] 1.20&Aring;' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[2v3g]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Acetivibrio_thermocellus Acetivibrio thermocellus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2V3G OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2V3G FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.2&#8491;</td></tr>
-
-->
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=BGC:BETA-D-GLUCOSE'>BGC</scene>, <scene name='pdbligand=NOY:(2R,3S,4R,5R)-5-(HYDROXYMETHYL)PIPERIDINE-2,3,4-TRIOL'>NOY</scene></td></tr>
-
{{STRUCTURE_2v3g| PDB=2v3g | SCENE= }}
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2v3g FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2v3g OCA], [https://pdbe.org/2v3g PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2v3g RCSB], [https://www.ebi.ac.uk/pdbsum/2v3g PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2v3g ProSAT]</span></td></tr>
 +
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/GUNH_ACET2 GUNH_ACET2] This enzyme catalyzes the endohydrolysis of 1,4-beta-glucosidic linkages in cellulose, lichenin and cereal beta-D-glucans.
 +
== Evolutionary Conservation ==
 +
[[Image:Consurf_key_small.gif|200px|right]]
 +
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/v3/2v3g_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2v3g ConSurf].
 +
<div style="clear:both"></div>
-
===STRUCTURE OF A FAMILY 26 LICHENASE IN COMPLEX WITH NOEUROMYCIN===
+
==See Also==
-
 
+
*[[Glucanase 3D structures|Glucanase 3D structures]]
-
 
+
__TOC__
-
==About this Structure==
+
</StructureSection>
-
2V3G is a 1 chain structure of sequence from [http://en.wikipedia.org/wiki/Clostridium_thermocellum Clostridium thermocellum]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2V3G OCA].
+
[[Category: Acetivibrio thermocellus]]
-
[[Category: Cellulase]]
+
[[Category: Large Structures]]
-
[[Category: Clostridium thermocellum]]
+
[[Category: Davies GJ]]
-
[[Category: Davies, G J.]]
+
[[Category: Gloster TM]]
-
[[Category: Gloster, T M.]]
+
[[Category: Meloncelli PJ]]
-
[[Category: Meloncelli, P J.]]
+
[[Category: Money VA]]
-
[[Category: Money, V A.]]
+
[[Category: Stick RV]]
-
[[Category: Stick, R V.]]
+
[[Category: Tarling CA]]
-
[[Category: Tarling, C A.]]
+
[[Category: Withers SG]]
-
[[Category: Withers, S G.]]
+
-
[[Category: Beta-1 4 beta-1 3 glucanase]]
+
-
[[Category: Carbohydrate metabolism]]
+
-
[[Category: Cellulose degradation]]
+
-
[[Category: Glycosidase]]
+
-
[[Category: Glycoside hydrolase family 26]]
+
-
[[Category: Hydrolase]]
+
-
[[Category: Lichenase]]
+
-
[[Category: Polysaccharide degradation]]
+
-
 
+
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Tue Feb 17 05:33:38 2009''
+

Current revision

Structure of a family 26 lichenase in complex with noeuromycin

PDB ID 2v3g

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools