This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


2fjr

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (09:23, 14 February 2024) (edit) (undo)
 
(8 intermediate revisions not shown.)
Line 1: Line 1:
-
{{Seed}}
 
-
[[Image:2fjr.png|left|200px]]
 
-
<!--
+
==Crystal Structure of Bacteriophage 186==
-
The line below this paragraph, containing "STRUCTURE_2fjr", creates the "Structure Box" on the page.
+
<StructureSection load='2fjr' size='340' side='right'caption='[[2fjr]], [[Resolution|resolution]] 1.95&Aring;' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[2fjr]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Escherichia_virus_186 Escherichia virus 186]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2FJR OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2FJR FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.95&#8491;</td></tr>
-
-->
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2fjr FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2fjr OCA], [https://pdbe.org/2fjr PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2fjr RCSB], [https://www.ebi.ac.uk/pdbsum/2fjr PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2fjr ProSAT]</span></td></tr>
-
{{STRUCTURE_2fjr| PDB=2fjr | SCENE= }}
+
</table>
-
 
+
== Function ==
-
===Crystal Structure of Bacteriophage 186===
+
[https://www.uniprot.org/uniprot/RPC1_BP186 RPC1_BP186] Repressor of lysogeny.
-
 
+
== Evolutionary Conservation ==
-
 
+
[[Image:Consurf_key_small.gif|200px|right]]
-
<!--
+
Check<jmol>
-
The line below this paragraph, {{ABSTRACT_PUBMED_16507359}}, adds the Publication Abstract to the page
+
<jmolCheckbox>
-
(as it appears on PubMed at http://www.pubmed.gov), where 16507359 is the PubMed ID number.
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/fj/2fjr_consurf.spt"</scriptWhenChecked>
-
-->
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
-
{{ABSTRACT_PUBMED_16507359}}
+
<text>to colour the structure by Evolutionary Conservation</text>
-
 
+
</jmolCheckbox>
-
==About this Structure==
+
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2fjr ConSurf].
-
2FJR is a 2 chains structure of sequences from [http://en.wikipedia.org/wiki/Enterobacteria_phage_186 Enterobacteria phage 186]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2FJR OCA].
+
<div style="clear:both"></div>
-
 
+
__TOC__
-
==Reference==
+
</StructureSection>
-
<ref group="xtra">PMID:16507359</ref><references group="xtra"/>
+
[[Category: Escherichia virus 186]]
-
[[Category: Enterobacteria phage 186]]
+
[[Category: Large Structures]]
-
[[Category: Lewis, M.]]
+
[[Category: Lewis M]]
-
[[Category: Cooperativity]]
+
-
[[Category: Genetic switch]]
+
-
[[Category: Regulation]]
+
-
[[Category: Repressor]]
+
-
 
+
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Tue Feb 17 06:19:58 2009''
+

Current revision

Crystal Structure of Bacteriophage 186

PDB ID 2fjr

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools