2hbv

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (09:31, 14 February 2024) (edit) (undo)
 
(8 intermediate revisions not shown.)
Line 1: Line 1:
-
{{Seed}}
 
-
[[Image:2hbv.png|left|200px]]
 
-
<!--
+
==Crystal Structure of alpha-Amino-beta-Carboxymuconate-epsilon-Semialdehyde-Decarboxylase (ACMSD)==
-
The line below this paragraph, containing "STRUCTURE_2hbv", creates the "Structure Box" on the page.
+
<StructureSection load='2hbv' size='340' side='right'caption='[[2hbv]], [[Resolution|resolution]] 1.65&Aring;' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[2hbv]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Pseudomonas_fluorescens Pseudomonas fluorescens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2HBV OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2HBV FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.65&#8491;</td></tr>
-
-->
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
-
{{STRUCTURE_2hbv| PDB=2hbv | SCENE= }}
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2hbv FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2hbv OCA], [https://pdbe.org/2hbv PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2hbv RCSB], [https://www.ebi.ac.uk/pdbsum/2hbv PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2hbv ProSAT]</span></td></tr>
-
 
+
</table>
-
===Crystal Structure of alpha-Amino-beta-Carboxymuconate-epsilon-Semialdehyde-Decarboxylase (ACMSD)===
+
== Function ==
-
 
+
[https://www.uniprot.org/uniprot/Q83V25_PSEFL Q83V25_PSEFL]
-
 
+
== Evolutionary Conservation ==
-
<!--
+
[[Image:Consurf_key_small.gif|200px|right]]
-
The line below this paragraph, {{ABSTRACT_PUBMED_16939194}}, adds the Publication Abstract to the page
+
Check<jmol>
-
(as it appears on PubMed at http://www.pubmed.gov), where 16939194 is the PubMed ID number.
+
<jmolCheckbox>
-
-->
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/hb/2hbv_consurf.spt"</scriptWhenChecked>
-
{{ABSTRACT_PUBMED_16939194}}
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
-
 
+
<text>to colour the structure by Evolutionary Conservation</text>
-
==About this Structure==
+
</jmolCheckbox>
-
2HBV is a 2 chains structure of sequences from [http://en.wikipedia.org/wiki/Pseudomonas_fluorescens Pseudomonas fluorescens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2HBV OCA].
+
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2hbv ConSurf].
-
 
+
<div style="clear:both"></div>
-
==Reference==
+
__TOC__
-
<ref group="xtra">PMID:16939194</ref><references group="xtra"/>
+
</StructureSection>
-
[[Category: Aminocarboxymuconate-semialdehyde decarboxylase]]
+
[[Category: Large Structures]]
[[Category: Pseudomonas fluorescens]]
[[Category: Pseudomonas fluorescens]]
-
[[Category: Eyobo, Y.]]
+
[[Category: Eyobo Y]]
-
[[Category: Li, T.]]
+
[[Category: Li T]]
-
[[Category: Liu, A.]]
+
[[Category: Liu A]]
-
[[Category: Martynowski, D.]]
+
[[Category: Martynowski D]]
-
[[Category: Yang, K.]]
+
[[Category: Yang K]]
-
[[Category: Zhang, H.]]
+
[[Category: Zhang H]]
-
[[Category: Acmsd]]
+
-
[[Category: Decarboxylase]]
+
-
[[Category: Metaloenzyme]]
+
-
[[Category: Tim-barrel]]
+
-
 
+
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Tue Feb 17 06:47:29 2009''
+

Current revision

Crystal Structure of alpha-Amino-beta-Carboxymuconate-epsilon-Semialdehyde-Decarboxylase (ACMSD)

PDB ID 2hbv

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools