1kmo

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (07:26, 14 February 2024) (edit) (undo)
 
(8 intermediate revisions not shown.)
Line 1: Line 1:
-
{{Seed}}
 
-
[[Image:1kmo.png|left|200px]]
 
-
<!--
+
==Crystal structure of the Outer Membrane Transporter FecA==
-
The line below this paragraph, containing "STRUCTURE_1kmo", creates the "Structure Box" on the page.
+
<StructureSection load='1kmo' size='340' side='right'caption='[[1kmo]], [[Resolution|resolution]] 2.00&Aring;' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[1kmo]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Escherichia_coli_K-12 Escherichia coli K-12]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1KMO OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1KMO FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2&#8491;</td></tr>
-
-->
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=HTO:HEPTANE-1,2,3-TRIOL'>HTO</scene>, <scene name='pdbligand=LDA:LAURYL+DIMETHYLAMINE-N-OXIDE'>LDA</scene></td></tr>
-
{{STRUCTURE_1kmo| PDB=1kmo | SCENE= }}
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1kmo FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1kmo OCA], [https://pdbe.org/1kmo PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1kmo RCSB], [https://www.ebi.ac.uk/pdbsum/1kmo PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1kmo ProSAT]</span></td></tr>
-
 
+
</table>
-
===Crystal structure of the Outer Membrane Transporter FecA===
+
== Function ==
-
 
+
[https://www.uniprot.org/uniprot/FECA_ECOLI FECA_ECOLI] FecA is the outer membrane receptor protein in the Fe(3+) dicitrate transport system.
-
 
+
== Evolutionary Conservation ==
-
<!--
+
[[Image:Consurf_key_small.gif|200px|right]]
-
The line below this paragraph, {{ABSTRACT_PUBMED_11872840}}, adds the Publication Abstract to the page
+
Check<jmol>
-
(as it appears on PubMed at http://www.pubmed.gov), where 11872840 is the PubMed ID number.
+
<jmolCheckbox>
-
-->
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/km/1kmo_consurf.spt"</scriptWhenChecked>
-
{{ABSTRACT_PUBMED_11872840}}
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
-
 
+
<text>to colour the structure by Evolutionary Conservation</text>
-
==About this Structure==
+
</jmolCheckbox>
-
1KMO is a 1 chain structure of sequence from [http://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1KMO OCA].
+
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1kmo ConSurf].
-
 
+
<div style="clear:both"></div>
-
==Reference==
+
__TOC__
-
<ref group="xtra">PMID:11872840</ref><references group="xtra"/>
+
</StructureSection>
-
[[Category: Escherichia coli]]
+
[[Category: Escherichia coli K-12]]
-
[[Category: Chakraborty, R.]]
+
[[Category: Large Structures]]
-
[[Category: Deisenhofer, J.]]
+
[[Category: Chakraborty R]]
-
[[Category: Esser, L.]]
+
[[Category: Deisenhofer J]]
-
[[Category: Ferguson, A D.]]
+
[[Category: Esser L]]
-
[[Category: Helm, D van der.]]
+
[[Category: Ferguson AD]]
-
[[Category: Smith, B S.]]
+
[[Category: Smith BS]]
-
[[Category: Iron transporter]]
+
[[Category: Van der Helm D]]
-
[[Category: Membrane protein]]
+
-
[[Category: Siderophore]]
+
-
[[Category: Tonb-dependent receptor]]
+
-
 
+
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Tue Feb 17 06:47:58 2009''
+

Current revision

Crystal structure of the Outer Membrane Transporter FecA

PDB ID 1kmo

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/1kmo"
Personal tools