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2qi2

From Proteopedia

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{{Seed}}
 
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[[Image:2qi2.png|left|200px]]
 
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<!--
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==Crystal structure of the Thermoplasma acidophilum Pelota protein==
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The line below this paragraph, containing "STRUCTURE_2qi2", creates the "Structure Box" on the page.
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<StructureSection load='2qi2' size='340' side='right'caption='[[2qi2]], [[Resolution|resolution]] 2.90&Aring;' scene=''>
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You may change the PDB parameter (which sets the PDB file loaded into the applet)
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== Structural highlights ==
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or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
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<table><tr><td colspan='2'>[[2qi2]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Thermoplasma_acidophilum Thermoplasma acidophilum]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2QI2 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2QI2 FirstGlance]. <br>
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or leave the SCENE parameter empty for the default display.
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.9&#8491;</td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2qi2 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2qi2 OCA], [https://pdbe.org/2qi2 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2qi2 RCSB], [https://www.ebi.ac.uk/pdbsum/2qi2 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2qi2 ProSAT]</span></td></tr>
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{{STRUCTURE_2qi2| PDB=2qi2 | SCENE= }}
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</table>
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== Function ==
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===Crystal structure of the Thermoplasma acidophilum Pelota protein===
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[https://www.uniprot.org/uniprot/PELO_THEAC PELO_THEAC] May function in recognizing stalled ribosomes, interact with stem-loop structures in stalled mRNA molecules, and effect endonucleolytic cleavage of the mRNA. May play a role in the release non-functional ribosomes and degradation of damaged mRNAs. Has endoribonuclease activity.<ref>PMID:17889667</ref>
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== Evolutionary Conservation ==
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[[Image:Consurf_key_small.gif|200px|right]]
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Check<jmol>
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The line below this paragraph, {{ABSTRACT_PUBMED_17889667}}, adds the Publication Abstract to the page
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<jmolCheckbox>
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(as it appears on PubMed at http://www.pubmed.gov), where 17889667 is the PubMed ID number.
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<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/qi/2qi2_consurf.spt"</scriptWhenChecked>
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<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
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{{ABSTRACT_PUBMED_17889667}}
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<text>to colour the structure by Evolutionary Conservation</text>
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</jmolCheckbox>
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==About this Structure==
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2qi2 ConSurf].
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2QI2 is a 1 chain structure of sequence from [http://en.wikipedia.org/wiki/Thermoplasma_acidophilum Thermoplasma acidophilum]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2QI2 OCA].
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<div style="clear:both"></div>
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== References ==
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==Reference==
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<references/>
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<ref group="xtra">PMID:17889667</ref><references group="xtra"/>
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__TOC__
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</StructureSection>
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[[Category: Large Structures]]
[[Category: Thermoplasma acidophilum]]
[[Category: Thermoplasma acidophilum]]
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[[Category: Heo, I H.]]
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[[Category: Heo IH]]
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[[Category: Kim, K H.]]
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[[Category: Kim KH]]
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[[Category: Kim, O.]]
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[[Category: Kim O]]
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[[Category: Kim, S K.]]
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[[Category: Kim SK]]
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[[Category: Kim, Y S.]]
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[[Category: Kim YS]]
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[[Category: Lee, H H.]]
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[[Category: Lee HH]]
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[[Category: Suh, S W.]]
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[[Category: Suh SW]]
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[[Category: Cell cycle]]
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[[Category: Dom34]]
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[[Category: Pelota]]
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Tue Feb 17 06:58:40 2009''
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Current revision

Crystal structure of the Thermoplasma acidophilum Pelota protein

PDB ID 2qi2

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