1sch

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (08:30, 1 May 2024) (edit) (undo)
 
(9 intermediate revisions not shown.)
Line 1: Line 1:
-
{{Seed}}
 
-
[[Image:1sch.png|left|200px]]
 
-
<!--
+
==PEANUT PEROXIDASE==
-
The line below this paragraph, containing "STRUCTURE_1sch", creates the "Structure Box" on the page.
+
<StructureSection load='1sch' size='340' side='right'caption='[[1sch]], [[Resolution|resolution]] 2.56&Aring;' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[1sch]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Arachis_hypogaea Arachis hypogaea]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1SCH OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1SCH FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.56&#8491;</td></tr>
-
-->
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=HEM:PROTOPORPHYRIN+IX+CONTAINING+FE'>HEM</scene>, <scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene>, <scene name='pdbligand=PCA:PYROGLUTAMIC+ACID'>PCA</scene></td></tr>
-
{{STRUCTURE_1sch| PDB=1sch | SCENE= }}
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1sch FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1sch OCA], [https://pdbe.org/1sch PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1sch RCSB], [https://www.ebi.ac.uk/pdbsum/1sch PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1sch ProSAT]</span></td></tr>
-
 
+
</table>
-
===PEANUT PEROXIDASE===
+
== Function ==
-
 
+
[https://www.uniprot.org/uniprot/PER1_ARAHY PER1_ARAHY] Removal of H(2)O(2), oxidation of toxic reductants, biosynthesis and degradation of lignin, suberization, auxin catabolism, response to environmental stresses such as wounding, pathogen attack and oxidative stress. These functions might be dependent on each isozyme/isoform in each plant tissue.
-
 
+
== Evolutionary Conservation ==
-
<!--
+
[[Image:Consurf_key_small.gif|200px|right]]
-
The line below this paragraph, {{ABSTRACT_PUBMED_8805539}}, adds the Publication Abstract to the page
+
Check<jmol>
-
(as it appears on PubMed at http://www.pubmed.gov), where 8805539 is the PubMed ID number.
+
<jmolCheckbox>
-
-->
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/sc/1sch_consurf.spt"</scriptWhenChecked>
-
{{ABSTRACT_PUBMED_8805539}}
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
-
 
+
<text>to colour the structure by Evolutionary Conservation</text>
-
==About this Structure==
+
</jmolCheckbox>
-
1SCH is a 2 chains structure of sequences from [http://en.wikipedia.org/wiki/Arachis_hypogaea Arachis hypogaea]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1SCH OCA].
+
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1sch ConSurf].
-
 
+
<div style="clear:both"></div>
-
==Reference==
+
__TOC__
-
<ref group="xtra">PMID:8805539</ref><references group="xtra"/>
+
</StructureSection>
[[Category: Arachis hypogaea]]
[[Category: Arachis hypogaea]]
-
[[Category: Peroxidase]]
+
[[Category: Large Structures]]
-
[[Category: Poulos, T L.]]
+
[[Category: Poulos TL]]
-
[[Category: Schuller, D J.]]
+
[[Category: Schuller DJ]]
-
[[Category: Calcium binding]]
+
-
[[Category: Glycosylation]]
+
-
[[Category: Oxidoreductase]]
+
-
[[Category: Peroxidase]]
+
-
 
+
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Tue Feb 17 07:09:09 2009''
+

Current revision

PEANUT PEROXIDASE

PDB ID 1sch

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/1sch"
Personal tools