This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.
Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.
1t4t
From Proteopedia
(Difference between revisions)
| (8 intermediate revisions not shown.) | |||
| Line 1: | Line 1: | ||
| - | {{Seed}} | ||
| - | [[Image:1t4t.png|left|200px]] | ||
| - | + | ==arginase-dinor-NOHA complex== | |
| - | + | <StructureSection load='1t4t' size='340' side='right'caption='[[1t4t]], [[Resolution|resolution]] 2.20Å' scene=''> | |
| - | + | == Structural highlights == | |
| - | + | <table><tr><td colspan='2'>[[1t4t]] is a 3 chain structure with sequence from [https://en.wikipedia.org/wiki/Rattus_norvegicus Rattus norvegicus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1T4T OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1T4T FirstGlance]. <br> | |
| - | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.2Å</td></tr> | |
| - | --> | + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=DIR:3-{[(E)-AMINO(HYDROXYIMINO)METHYL]AMINO}ALANINE'>DIR</scene>, <scene name='pdbligand=MN:MANGANESE+(II)+ION'>MN</scene></td></tr> |
| - | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1t4t FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1t4t OCA], [https://pdbe.org/1t4t PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1t4t RCSB], [https://www.ebi.ac.uk/pdbsum/1t4t PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1t4t ProSAT]</span></td></tr> | |
| + | </table> | ||
| + | == Function == | ||
| + | [https://www.uniprot.org/uniprot/ARGI1_RAT ARGI1_RAT] | ||
| + | == Evolutionary Conservation == | ||
| + | [[Image:Consurf_key_small.gif|200px|right]] | ||
| + | Check<jmol> | ||
| + | <jmolCheckbox> | ||
| + | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/t4/1t4t_consurf.spt"</scriptWhenChecked> | ||
| + | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | ||
| + | <text>to colour the structure by Evolutionary Conservation</text> | ||
| + | </jmolCheckbox> | ||
| + | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1t4t ConSurf]. | ||
| + | <div style="clear:both"></div> | ||
| - | == | + | ==See Also== |
| - | + | *[[Arginase 3D structures|Arginase 3D structures]] | |
| - | + | __TOC__ | |
| - | + | </StructureSection> | |
| - | + | [[Category: Large Structures]] | |
| - | + | ||
| - | + | ||
| - | + | ||
| - | + | ||
| - | + | ||
| - | + | ||
| - | + | ||
| - | + | ||
| - | + | ||
| - | [[Category: | + | |
[[Category: Rattus norvegicus]] | [[Category: Rattus norvegicus]] | ||
| - | [[Category: Ash | + | [[Category: Ash DE]] |
| - | [[Category: Boucher | + | [[Category: Boucher J-L]] |
| - | [[Category: Cama | + | [[Category: Cama E]] |
| - | [[Category: Christianson | + | [[Category: Christianson DW]] |
| - | [[Category: Emig | + | [[Category: Emig FA]] |
| - | [[Category: Mansuy | + | [[Category: Mansuy D]] |
| - | [[Category: Pethe | + | [[Category: Pethe S]] |
| - | [[Category: Shoufa | + | [[Category: Shoufa H]] |
| - | [[Category: Viola | + | [[Category: Viola RE]] |
| - | + | ||
| - | + | ||
| - | + | ||
| - | + | ||
Current revision
arginase-dinor-NOHA complex
| |||||||||||
Categories: Large Structures | Rattus norvegicus | Ash DE | Boucher J-L | Cama E | Christianson DW | Emig FA | Mansuy D | Pethe S | Shoufa H | Viola RE

