This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


1dd6

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (06:52, 7 February 2024) (edit) (undo)
 
(12 intermediate revisions not shown.)
Line 1: Line 1:
-
{{Seed}}
 
-
[[Image:1dd6.png|left|200px]]
 
-
<!--
+
==IMP-1 METALLO BETA-LACTAMASE FROM PSEUDOMONAS AERUGINOSA IN COMPLEX WITH A MERCAPTOCARBOXYLATE INHIBITOR==
-
The line below this paragraph, containing "STRUCTURE_1dd6", creates the "Structure Box" on the page.
+
<StructureSection load='1dd6' size='340' side='right'caption='[[1dd6]], [[Resolution|resolution]] 2.00&Aring;' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[1dd6]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Pseudomonas_aeruginosa Pseudomonas aeruginosa]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1DD6 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1DD6 FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2&#8491;</td></tr>
-
-->
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MCI:(2-MERCAPTOMETHYL-4-PHENYL-BUTYRYLIMINO)-(5-TETRAZOL-1-YLMETHYL-THIOPHEN-2-YL)-ACETIC+ACID'>MCI</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
-
{{STRUCTURE_1dd6| PDB=1dd6 | SCENE= }}
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1dd6 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1dd6 OCA], [https://pdbe.org/1dd6 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1dd6 RCSB], [https://www.ebi.ac.uk/pdbsum/1dd6 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1dd6 ProSAT]</span></td></tr>
 +
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/BLAB_SERMA BLAB_SERMA] Confers resistance to imipenem and broad-spectrum beta-lactams. Also hydrolyzes carbapenems.
 +
== Evolutionary Conservation ==
 +
[[Image:Consurf_key_small.gif|200px|right]]
 +
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/dd/1dd6_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1dd6 ConSurf].
 +
<div style="clear:both"></div>
-
===IMP-1 METALLO BETA-LACTAMASE FROM PSEUDOMONAS AERUGINOSA IN COMPLEX WITH A MERCAPTOCARBOXYLATE INHIBITOR===
+
==See Also==
-
 
+
*[[Beta-lactamase 3D structures|Beta-lactamase 3D structures]]
-
 
+
__TOC__
-
<!--
+
</StructureSection>
-
The line below this paragraph, {{ABSTRACT_PUBMED_10757977}}, adds the Publication Abstract to the page
+
[[Category: Large Structures]]
-
(as it appears on PubMed at http://www.pubmed.gov), where 10757977 is the PubMed ID number.
+
-
-->
+
-
{{ABSTRACT_PUBMED_10757977}}
+
-
 
+
-
==About this Structure==
+
-
1DD6 is a 2 chains structure of sequences from [http://en.wikipedia.org/wiki/Pseudomonas_aeruginosa Pseudomonas aeruginosa]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1DD6 OCA].
+
-
 
+
-
==Reference==
+
-
<ref group="xtra">PMID:10757977</ref><references group="xtra"/>
+
-
[[Category: Beta-lactamase]]
+
[[Category: Pseudomonas aeruginosa]]
[[Category: Pseudomonas aeruginosa]]
-
[[Category: Abdel-Meguid, S S.]]
+
[[Category: Abdel-Meguid SS]]
-
[[Category: Bateson, J H.]]
+
[[Category: Bateson JH]]
-
[[Category: Cheever, C A.]]
+
[[Category: Cheever CA]]
-
[[Category: Clarke, B P.]]
+
[[Category: Clarke BP]]
-
[[Category: Concha, N O.]]
+
[[Category: Concha NO]]
-
[[Category: Frere, J M.]]
+
[[Category: Frere JM]]
-
[[Category: Galleni, M.]]
+
[[Category: Galleni M]]
-
[[Category: Janson, C A.]]
+
[[Category: Janson CA]]
-
[[Category: Lewis, C.]]
+
[[Category: Lewis C]]
-
[[Category: Payne, D J.]]
+
[[Category: Payne DJ]]
-
[[Category: Pearson, S.]]
+
[[Category: Pearson S]]
-
[[Category: Rowling, P.]]
+
[[Category: Rowling P]]
-
[[Category: Imp-1 metallo beta-lactamase]]
+
-
[[Category: Mercaptocarboxylate inhibitor]]
+
-
[[Category: Metallo beta-lactamase inhibitor]]
+
-
 
+
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Tue Feb 17 08:03:47 2009''
+

Current revision

IMP-1 METALLO BETA-LACTAMASE FROM PSEUDOMONAS AERUGINOSA IN COMPLEX WITH A MERCAPTOCARBOXYLATE INHIBITOR

PDB ID 1dd6

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools