1xdw

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (08:49, 14 February 2024) (edit) (undo)
 
(8 intermediate revisions not shown.)
Line 1: Line 1:
-
{{Seed}}
 
-
[[Image:1xdw.png|left|200px]]
 
-
<!--
+
==NAD+-dependent (R)-2-Hydroxyglutarate Dehydrogenase from Acidaminococcus fermentans==
-
The line below this paragraph, containing "STRUCTURE_1xdw", creates the "Structure Box" on the page.
+
<StructureSection load='1xdw' size='340' side='right'caption='[[1xdw]], [[Resolution|resolution]] 1.98&Aring;' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[1xdw]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Acidaminococcus_fermentans Acidaminococcus fermentans]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1XDW OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1XDW FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.98&#8491;</td></tr>
-
-->
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1xdw FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1xdw OCA], [https://pdbe.org/1xdw PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1xdw RCSB], [https://www.ebi.ac.uk/pdbsum/1xdw PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1xdw ProSAT]</span></td></tr>
-
{{STRUCTURE_1xdw| PDB=1xdw | SCENE= }}
+
</table>
-
 
+
== Evolutionary Conservation ==
-
===NAD+-dependent (R)-2-Hydroxyglutarate Dehydrogenase from Acidaminococcus fermentans===
+
[[Image:Consurf_key_small.gif|200px|right]]
-
 
+
Check<jmol>
-
 
+
<jmolCheckbox>
-
<!--
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/xd/1xdw_consurf.spt"</scriptWhenChecked>
-
The line below this paragraph, {{ABSTRACT_PUBMED_15634349}}, adds the Publication Abstract to the page
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
-
(as it appears on PubMed at http://www.pubmed.gov), where 15634349 is the PubMed ID number.
+
<text>to colour the structure by Evolutionary Conservation</text>
-
-->
+
</jmolCheckbox>
-
{{ABSTRACT_PUBMED_15634349}}
+
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1xdw ConSurf].
-
 
+
<div style="clear:both"></div>
-
==About this Structure==
+
__TOC__
-
1XDW is a 1 chain structure of sequence from [http://en.wikipedia.org/wiki/Acidaminococcus_fermentans Acidaminococcus fermentans]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1XDW OCA].
+
</StructureSection>
-
 
+
-
==Reference==
+
-
<ref group="xtra">PMID:15634349</ref><references group="xtra"/>
+
[[Category: Acidaminococcus fermentans]]
[[Category: Acidaminococcus fermentans]]
-
[[Category: Bresser, J.]]
+
[[Category: Large Structures]]
-
[[Category: Buckel, W.]]
+
[[Category: Bresser J]]
-
[[Category: Macedo-Ribeiro, S.]]
+
[[Category: Buckel W]]
-
[[Category: Martins, B M.]]
+
[[Category: Macedo-Ribeiro S]]
-
[[Category: Messerschmidt, A.]]
+
[[Category: Martins BM]]
-
[[Category: Structural variant of the bab rossmann fold]]
+
[[Category: Messerschmidt A]]
-
 
+
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Tue Feb 17 08:07:50 2009''
+

Current revision

NAD+-dependent (R)-2-Hydroxyglutarate Dehydrogenase from Acidaminococcus fermentans

PDB ID 1xdw

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools