Template:STRUCTURE 1d66

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (09:58, 11 March 2013) (edit) (undo)
 
(3 intermediate revisions not shown.)
Line 1: Line 1:
{{Structure
{{Structure
-
|PDB= {{{PDB}}}|SCENE={{{SCENE|}}}|SIZE={{{SIZE|350}}}|CAPTION={{{CAPTION|[[1d66]], resolution 2.70&Aring; (<scene name='initialview01'>default scene</scene>)}}}
+
|PDB= {{{PDB}}}|SCENE={{{SCENE|}}}|SIZE={{{SIZE|350}}}|CAPTION={{{CAPTION|[[1d66]], [[Resolution|resolution]] 2.70&Aring; (<scene name='initialview01'>default scene</scene>)}}}
|LIGAND= <scene name='pdbligand=CD:CADMIUM+ION'>CD</scene>
|LIGAND= <scene name='pdbligand=CD:CADMIUM+ION'>CD</scene>
-
|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1d66 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1d66 OCA], [http://www.ebi.ac.uk/pdbsum/1d66 PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=1d66 RCSB]</span>
+
|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1d66 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1d66 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=1d66 RCSB], [http://www.ebi.ac.uk/pdbsum/1d66 PDBsum]</span>
|FUNCTION={{GO|id=GO:0003700 | text = transcription factor activity}}{{GO|id=GO:0003677 | text = DNA binding}}{{GO|id=GO:0046872 | text = metal ion binding}}{{GO|id=GO:0016563 | text = transcription activator activity}}{{GO|id=GO:0008270 | text = zinc ion binding}}
|FUNCTION={{GO|id=GO:0003700 | text = transcription factor activity}}{{GO|id=GO:0003677 | text = DNA binding}}{{GO|id=GO:0046872 | text = metal ion binding}}{{GO|id=GO:0016563 | text = transcription activator activity}}{{GO|id=GO:0008270 | text = zinc ion binding}}
|PROCESS={{GO|id=GO:0005975 | text = carbohydrate metabolic process}}{{GO|id=GO:0000411 | text = positive regulation of transcription by galactose}}{{GO|id=GO:0006350 | text = transcription}}{{GO|id=GO:0006012 | text = galactose metabolic process}}{{GO|id=GO:0006355 | text = regulation of transcription, DNA-dependent}}
|PROCESS={{GO|id=GO:0005975 | text = carbohydrate metabolic process}}{{GO|id=GO:0000411 | text = positive regulation of transcription by galactose}}{{GO|id=GO:0006350 | text = transcription}}{{GO|id=GO:0006012 | text = galactose metabolic process}}{{GO|id=GO:0006355 | text = regulation of transcription, DNA-dependent}}
|COMPONENT={{GO|id=GO:0005634 | text = nucleus}}
|COMPONENT={{GO|id=GO:0005634 | text = nucleus}}
|SARESOURCES=<span class='plainlinks'>CATH : [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1d66B01 1D66B01]<br>InterPro : [http://www.ebi.ac.uk/interpro/ISearch?query=IPR007219 Ipr007219], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR005600 Ipr005600], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR001138 Ipr001138], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR002409 Ipr002409]<br>Pfam : [http://pfam.sanger.ac.uk/family?acc=PF00172 PF00172], [http://pfam.sanger.ac.uk/family?acc=PF03902 PF03902]<br>SCOP : [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&amp;key=45510 d1d66a2], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&amp;key=45076 d1d66a1], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&amp;key=45077 d1d66b1], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&amp;key=45511 d1d66b2]<br>UniProt : [http://ca.expasy.org/cgi-bin/niceprot.pl?P04386 P04386]</span>
|SARESOURCES=<span class='plainlinks'>CATH : [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1d66B01 1D66B01]<br>InterPro : [http://www.ebi.ac.uk/interpro/ISearch?query=IPR007219 Ipr007219], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR005600 Ipr005600], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR001138 Ipr001138], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR002409 Ipr002409]<br>Pfam : [http://pfam.sanger.ac.uk/family?acc=PF00172 PF00172], [http://pfam.sanger.ac.uk/family?acc=PF03902 PF03902]<br>SCOP : [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&amp;key=45510 d1d66a2], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&amp;key=45076 d1d66a1], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&amp;key=45077 d1d66b1], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&amp;key=45511 d1d66b2]<br>UniProt : [http://ca.expasy.org/cgi-bin/niceprot.pl?P04386 P04386]</span>
-
|CONSURF={{!}}-
+
|uPDB=1D66|CONSURF={{!}}-
{{!}} colspan="2" style="background-color:#bac9f7;color:#040d44;vertical-align:top;text-align:left;" {{!}} [[Image:Consurf_key_small.gif|center]]
{{!}} colspan="2" style="background-color:#bac9f7;color:#040d44;vertical-align:top;text-align:left;" {{!}} [[Image:Consurf_key_small.gif|center]]
{{!}}-{{!}} style="background-color:#bac9f7;color:#040d44;vertical-align:top;text-align:left;"
{{!}}-{{!}} style="background-color:#bac9f7;color:#040d44;vertical-align:top;text-align:left;"
Line 16: Line 16:
<jmolButton>
<jmolButton>
<script></script>
<script></script>
-
<text>A [x]</text>
+
<text>D [x]</text>
-
<name>jmb_1d66_A</name>
+
<name>jmb_1d66_D</name>
-
<title>toggle chain A</title>
+
<title>toggle chain D</title>
<jsscript>ConsurfChainButton(elementClicked)</jsscript>
<jsscript>ConsurfChainButton(elementClicked)</jsscript>
<appendtargetsuffixtoid>true</appendtargetsuffixtoid>
<appendtargetsuffixtoid>true</appendtargetsuffixtoid>
Line 27: Line 27:
<jmolButton>
<jmolButton>
<script></script>
<script></script>
-
<text>B [x]</text>
+
<text>E [x]</text>
-
<name>jmb_1d66_B</name>
+
<name>jmb_1d66_E</name>
-
<title>toggle chain B</title>
+
<title>toggle chain E</title>
<jsscript>ConsurfChainButton(elementClicked)</jsscript>
<jsscript>ConsurfChainButton(elementClicked)</jsscript>
<appendtargetsuffixtoid>true</appendtargetsuffixtoid>
<appendtargetsuffixtoid>true</appendtargetsuffixtoid>
Line 38: Line 38:
<jmolButton>
<jmolButton>
<script></script>
<script></script>
-
<text>C [x]</text>
+
<text>A [x]</text>
-
<name>jmb_1d66_C</name>
+
<name>jmb_1d66_A</name>
-
<title>toggle chain C</title>
+
<title>toggle chain A</title>
<jsscript>ConsurfChainButton(elementClicked)</jsscript>
<jsscript>ConsurfChainButton(elementClicked)</jsscript>
<appendtargetsuffixtoid>true</appendtargetsuffixtoid>
<appendtargetsuffixtoid>true</appendtargetsuffixtoid>
Line 48: Line 48:
<jmolButton>
<jmolButton>
<script></script>
<script></script>
-
<text>D [x]</text>
+
<text>B [x]</text>
-
<name>jmb_1d66_D</name>
+
<name>jmb_1d66_B</name>
-
<title>toggle chain D</title>
+
<title>toggle chain B</title>
<jsscript>ConsurfChainButton(elementClicked)</jsscript>
<jsscript>ConsurfChainButton(elementClicked)</jsscript>
<appendtargetsuffixtoid>true</appendtargetsuffixtoid>
<appendtargetsuffixtoid>true</appendtargetsuffixtoid>

Current revision

Drag the structure with the mouse to rotate
1d66, resolution 2.70Å ()
Ligands:
Resources: FirstGlance, OCA, RCSB, PDBsum
Coordinates: save as pdb, mmCIF, xml


Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools