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1pso
From Proteopedia
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| - | {{Seed}} | ||
| - | [[Image:1pso.png|left|200px]] | ||
| - | < | + | ==The crystal structure of human pepsin and its complex with pepstatin== |
| - | + | <StructureSection load='1pso' size='340' side='right'caption='[[1pso]], [[Resolution|resolution]] 2.00Å' scene=''> | |
| - | + | == Structural highlights == | |
| - | + | <table><tr><td colspan='2'>[[1pso]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens] and [https://en.wikipedia.org/wiki/Streptomyces_argenteolus_subsp._toyonakensis Streptomyces argenteolus subsp. toyonakensis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1PSO OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1PSO FirstGlance]. <br> | |
| - | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2Å</td></tr> | |
| - | + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=IVA:ISOVALERIC+ACID'>IVA</scene>, <scene name='pdbligand=STA:STATINE'>STA</scene></td></tr> | |
| - | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1pso FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1pso OCA], [https://pdbe.org/1pso PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1pso RCSB], [https://www.ebi.ac.uk/pdbsum/1pso PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1pso ProSAT]</span></td></tr> | |
| + | </table> | ||
| + | == Function == | ||
| + | [https://www.uniprot.org/uniprot/PEPA4_HUMAN PEPA4_HUMAN] Shows particularly broad specificity; although bonds involving phenylalanine and leucine are preferred, many others are also cleaved to some extent. | ||
| + | == Evolutionary Conservation == | ||
| + | [[Image:Consurf_key_small.gif|200px|right]] | ||
| + | Check<jmol> | ||
| + | <jmolCheckbox> | ||
| + | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ps/1pso_consurf.spt"</scriptWhenChecked> | ||
| + | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | ||
| + | <text>to colour the structure by Evolutionary Conservation</text> | ||
| + | </jmolCheckbox> | ||
| + | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1pso ConSurf]. | ||
| + | <div style="clear:both"></div> | ||
| - | == | + | ==See Also== |
| - | + | *[[Pepsin|Pepsin]] | |
| - | + | __TOC__ | |
| - | < | + | </StructureSection> |
| - | + | [[Category: Homo sapiens]] | |
| - | + | [[Category: Large Structures]] | |
| - | + | [[Category: Streptomyces argenteolus subsp. toyonakensis]] | |
| - | + | [[Category: Chernaia MM]] | |
| - | + | [[Category: Fujinaga M]] | |
| - | + | [[Category: James MNG]] | |
| - | + | [[Category: Mosimann SC]] | |
| - | + | [[Category: Tarasova N]] | |
| - | + | ||
| - | + | ||
| - | [[Category: | + | |
| - | [[Category: Chernaia | + | |
| - | [[Category: Fujinaga | + | |
| - | [[Category: James | + | |
| - | [[Category: Mosimann | + | |
| - | [[Category: Tarasova | + | |
| - | + | ||
| - | + | ||
Current revision
The crystal structure of human pepsin and its complex with pepstatin
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