2cya

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{{Seed}}
 
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[[Image:2cya.png|left|200px]]
 
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==Crystal structure of tyrosyl-tRNA synthetase from Aeropyrum pernix==
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The line below this paragraph, containing "STRUCTURE_2cya", creates the "Structure Box" on the page.
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<StructureSection load='2cya' size='340' side='right'caption='[[2cya]], [[Resolution|resolution]] 2.20&Aring;' scene=''>
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You may change the PDB parameter (which sets the PDB file loaded into the applet)
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== Structural highlights ==
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or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
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<table><tr><td colspan='2'>[[2cya]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Aeropyrum_pernix Aeropyrum pernix]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2CYA OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2CYA FirstGlance]. <br>
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or leave the SCENE parameter empty for the default display.
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.2&#8491;</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
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{{STRUCTURE_2cya| PDB=2cya | SCENE= }}
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2cya FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2cya OCA], [https://pdbe.org/2cya PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2cya RCSB], [https://www.ebi.ac.uk/pdbsum/2cya PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2cya ProSAT], [https://www.topsan.org/Proteins/RSGI/2cya TOPSAN]</span></td></tr>
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</table>
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== Function ==
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[https://www.uniprot.org/uniprot/SYY_AERPE SYY_AERPE] Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction: tyrosine is first activated by ATP to form Tyr-AMP and then transferred to the acceptor end of tRNA(Tyr).[HAMAP-Rule:MF_02009]
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== Evolutionary Conservation ==
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[[Image:Consurf_key_small.gif|200px|right]]
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Check<jmol>
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<jmolCheckbox>
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<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/cy/2cya_consurf.spt"</scriptWhenChecked>
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<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
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<text>to colour the structure by Evolutionary Conservation</text>
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</jmolCheckbox>
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2cya ConSurf].
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<div style="clear:both"></div>
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===Crystal structure of tyrosyl-tRNA synthetase from Aeropyrum pernix===
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==See Also==
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*[[Aminoacyl tRNA synthetase 3D structures|Aminoacyl tRNA synthetase 3D structures]]
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__TOC__
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</StructureSection>
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The line below this paragraph, {{ABSTRACT_PUBMED_16325203}}, adds the Publication Abstract to the page
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(as it appears on PubMed at http://www.pubmed.gov), where 16325203 is the PubMed ID number.
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{{ABSTRACT_PUBMED_16325203}}
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==About this Structure==
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2CYA is a 1 chain structure of sequence from [http://en.wikipedia.org/wiki/Aeropyrum_pernix Aeropyrum pernix]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2CYA OCA].
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==Reference==
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<ref group="xtra">PMID:16325203</ref><references group="xtra"/>
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[[Category: Aeropyrum pernix]]
[[Category: Aeropyrum pernix]]
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[[Category: Tyrosine--tRNA ligase]]
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[[Category: Large Structures]]
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[[Category: Bessho, Y.]]
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[[Category: Bessho Y]]
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[[Category: Chen, L.]]
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[[Category: Chen L]]
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[[Category: Kobayashi, T.]]
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[[Category: Kobayashi T]]
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[[Category: Kuramitsu, S.]]
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[[Category: Kuramitsu S]]
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[[Category: Kuratani, M.]]
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[[Category: Kuratani M]]
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[[Category: Kuroishi, C.]]
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[[Category: Kuroishi C]]
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[[Category: Liu, Z J.]]
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[[Category: Liu ZJ]]
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[[Category: Murayama, K.]]
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[[Category: Murayama K]]
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[[Category: RSGI, RIKEN Structural Genomics/Proteomics Initiative.]]
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[[Category: Sakai H]]
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[[Category: Sakai, H.]]
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[[Category: Sekine SI]]
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[[Category: Sekine, S I.]]
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[[Category: Shirouzu M]]
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[[Category: Shirouzu, M.]]
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[[Category: Takahashi M]]
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[[Category: Takahashi, M.]]
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[[Category: Terada T]]
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[[Category: Terada, T.]]
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[[Category: Wang BC]]
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[[Category: Wang, B C.]]
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[[Category: Yanagisawa T]]
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[[Category: Yanagisawa, T.]]
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[[Category: Yokoyama S]]
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[[Category: Yokoyama, S.]]
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[[Category: Aminoacylation]]
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[[Category: National project on protein structural and functional analyse]]
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[[Category: Nppsfa]]
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[[Category: Riken structural genomics/proteomics initiative]]
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[[Category: Rsgi]]
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[[Category: Structural genomic]]
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[[Category: Tyrr]]
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Tue Feb 17 08:33:14 2009''
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Current revision

Crystal structure of tyrosyl-tRNA synthetase from Aeropyrum pernix

PDB ID 2cya

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Proteopedia Page Contributors and Editors (what is this?)

OCA

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