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2zac

From Proteopedia

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Current revision (09:22, 9 February 2016) (edit) (undo)
 
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{{Seed}}
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==Crystal Structure of Family 7 Alginate Lyase A1-II' Y284F in Complex with Product (MMG)==
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[[Image:2zac.png|left|200px]]
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<StructureSection load='2zac' size='340' side='right' caption='[[2zac]], [[Resolution|resolution]] 1.50&Aring;' scene=''>
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== Structural highlights ==
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<!--
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<table><tr><td colspan='2'>[[2zac]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Sphingomonas_sp._a1 Sphingomonas sp. a1]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2ZAC OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2ZAC FirstGlance]. <br>
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The line below this paragraph, containing "STRUCTURE_2zac", creates the "Structure Box" on the page.
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</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=BEM:BETA-D-MANNURONIC+ACID'>BEM</scene>, <scene name='pdbligand=LGU:ALPHA-L-GULURONATE'>LGU</scene></td></tr>
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You may change the PDB parameter (which sets the PDB file loaded into the applet)
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<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[2cws|2cws]], [[2z42|2z42]], [[2za9|2za9]], [[2zaa|2zaa]], [[2zab|2zab]]</td></tr>
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or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
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<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">aly ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=90322 Sphingomonas sp. A1])</td></tr>
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or leave the SCENE parameter empty for the default display.
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<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Poly(beta-D-mannuronate)_lyase Poly(beta-D-mannuronate) lyase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=4.2.2.3 4.2.2.3] </span></td></tr>
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-->
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2zac FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2zac OCA], [http://pdbe.org/2zac PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2zac RCSB], [http://www.ebi.ac.uk/pdbsum/2zac PDBsum]</span></td></tr>
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{{STRUCTURE_2zac| PDB=2zac | SCENE= }}
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</table>
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== Evolutionary Conservation ==
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===Crystal Structure of Family 7 Alginate Lyase A1-II' Y284F in Complex with Product (MMG)===
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[[Image:Consurf_key_small.gif|200px|right]]
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Check<jmol>
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<jmolCheckbox>
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==About this Structure==
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<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/za/2zac_consurf.spt"</scriptWhenChecked>
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2ZAC is a 1 chain structure of sequence from [http://en.wikipedia.org/wiki/Sphingomonas_sp._a1 Sphingomonas sp. a1]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2ZAC OCA].
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<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
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<text>to colour the structure by Evolutionary Conservation</text>
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</jmolCheckbox>
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2zac ConSurf].
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<div style="clear:both"></div>
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__TOC__
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</StructureSection>
[[Category: Sphingomonas sp. a1]]
[[Category: Sphingomonas sp. a1]]
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[[Category: Hashimoto, W.]]
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[[Category: Hashimoto, W]]
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[[Category: Mikami, B.]]
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[[Category: Mikami, B]]
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[[Category: Murata, K.]]
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[[Category: Murata, K]]
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[[Category: Ogura, K.]]
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[[Category: Ogura, K]]
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[[Category: Yamasaki, M.]]
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[[Category: Yamasaki, M]]
[[Category: Alginate]]
[[Category: Alginate]]
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[[Category: Lyase]]
[[Category: Polysaccharide lyase family 7]]
[[Category: Polysaccharide lyase family 7]]
[[Category: Y284f_mmg complex]]
[[Category: Y284f_mmg complex]]
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Tue Feb 17 08:44:26 2009''
 

Current revision

Crystal Structure of Family 7 Alginate Lyase A1-II' Y284F in Complex with Product (MMG)

2zac, resolution 1.50Å

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