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1rnl

From Proteopedia

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{{Seed}}
 
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[[Image:1rnl.png|left|200px]]
 
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==THE NITRATE/NITRITE RESPONSE REGULATOR PROTEIN NARL FROM NARL==
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The line below this paragraph, containing "STRUCTURE_1rnl", creates the "Structure Box" on the page.
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<StructureSection load='1rnl' size='340' side='right'caption='[[1rnl]], [[Resolution|resolution]] 2.40&Aring;' scene=''>
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You may change the PDB parameter (which sets the PDB file loaded into the applet)
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== Structural highlights ==
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or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
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<table><tr><td colspan='2'>[[1rnl]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Escherichia_coli_str._K-12_substr._W3110 Escherichia coli str. K-12 substr. W3110]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1RNL OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1RNL FirstGlance]. <br>
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or leave the SCENE parameter empty for the default display.
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.4&#8491;</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=PT:PLATINUM+(II)+ION'>PT</scene></td></tr>
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{{STRUCTURE_1rnl| PDB=1rnl | SCENE= }}
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1rnl FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1rnl OCA], [https://pdbe.org/1rnl PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1rnl RCSB], [https://www.ebi.ac.uk/pdbsum/1rnl PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1rnl ProSAT]</span></td></tr>
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</table>
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== Function ==
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[https://www.uniprot.org/uniprot/NARL_ECOLI NARL_ECOLI] This protein activates the expression of the nitrate reductase (narGHJI) and formate dehydrogenase-N (fdnGHI) operons and represses the transcription of the fumarate reductase (frdABCD) operon in response to a nitrate/nitrite induction signal transmitted by either the NarX or NarQ proteins.
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== Evolutionary Conservation ==
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[[Image:Consurf_key_small.gif|200px|right]]
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Check<jmol>
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<jmolCheckbox>
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<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/rn/1rnl_consurf.spt"</scriptWhenChecked>
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<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
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<text>to colour the structure by Evolutionary Conservation</text>
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</jmolCheckbox>
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1rnl ConSurf].
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<div style="clear:both"></div>
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===THE NITRATE/NITRITE RESPONSE REGULATOR PROTEIN NARL FROM NARL===
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==See Also==
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*[[Response regulator 3D structure|Response regulator 3D structure]]
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__TOC__
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</StructureSection>
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The line below this paragraph, {{ABSTRACT_PUBMED_8780507}}, adds the Publication Abstract to the page
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[[Category: Escherichia coli str. K-12 substr. W3110]]
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(as it appears on PubMed at http://www.pubmed.gov), where 8780507 is the PubMed ID number.
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[[Category: Large Structures]]
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[[Category: Baikalov I]]
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{{ABSTRACT_PUBMED_8780507}}
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[[Category: Dickerson RE]]
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[[Category: Grzeskowiak K]]
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==About this Structure==
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[[Category: Gunsalus RP]]
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1RNL is a 1 chain structure of sequence from [http://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1RNL OCA].
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[[Category: Kaczor-Grzeskowiak M]]
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[[Category: Schroder I]]
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==Reference==
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<ref group="xtra">PMID:8780507</ref><references group="xtra"/>
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[[Category: Escherichia coli]]
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[[Category: Baikalov, I.]]
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[[Category: Dickerson, R E.]]
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[[Category: Grzeskowiak, K.]]
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[[Category: Gunsalus, R P.]]
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[[Category: Kaczor-Grzeskowiak, M.]]
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[[Category: Schroder, I.]]
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[[Category: Response regulator]]
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[[Category: Signal transduction protein]]
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[[Category: Two-component system]]
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Tue Feb 17 08:54:41 2009''
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Current revision

THE NITRATE/NITRITE RESPONSE REGULATOR PROTEIN NARL FROM NARL

PDB ID 1rnl

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