2jot

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (09:13, 6 November 2024) (edit) (undo)
 
(11 intermediate revisions not shown.)
Line 1: Line 1:
-
{{Seed}}
 
-
[[Image:2jot.png|left|200px]]
 
-
<!--
+
==Nuclear Magnetic Resonance Studies on Huwentoxin-XI from the Chinese Bird Spider Ornithoctonus huwena==
-
The line below this paragraph, containing "STRUCTURE_2jot", creates the "Structure Box" on the page.
+
<StructureSection load='2jot' size='340' side='right'caption='[[2jot]]' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[2jot]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Cyriopagopus_schmidti Cyriopagopus schmidti]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2JOT OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2JOT FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Solution NMR, 20 models</td></tr>
-
-->
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2jot FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2jot OCA], [https://pdbe.org/2jot PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2jot RCSB], [https://www.ebi.ac.uk/pdbsum/2jot PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2jot ProSAT]</span></td></tr>
-
{{STRUCTURE_2jot| PDB=2jot | SCENE= }}
+
</table>
-
 
+
== Function ==
-
===Nuclear Magnetic Resonance Studies on Huwentoxin-XI from the Chinese Bird Spider Ornithoctonus huwena===
+
[https://www.uniprot.org/uniprot/VKT1A_CYRSC VKT1A_CYRSC] Dual-function toxin that inhibits both serine proteases (trypsin) and voltage-gated potassium channels (Kv). The toxin is more active on Kv1.1/KCNA1 (78% inhibition), than on Kv1.2/KCNA2 (10% inhibition), and Kv1.3/KCNA3 (28% inhibition), although a high dose (5 uM) is needed. The inhibition of potassium channels is voltage-dependent.<ref>PMID:15066414</ref> <ref>PMID:16820861</ref>
-
 
+
== Evolutionary Conservation ==
-
 
+
[[Image:Consurf_key_small.gif|200px|right]]
-
==About this Structure==
+
Check<jmol>
-
2JOT is a 1 chain structure of sequence from [http://en.wikipedia.org/wiki/Ornithoctonus_huwena Ornithoctonus huwena]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2JOT OCA].
+
<jmolCheckbox>
-
[[Category: Ornithoctonus huwena]]
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/jo/2jot_consurf.spt"</scriptWhenChecked>
-
[[Category: Liang, S.]]
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
-
[[Category: Peng, K.]]
+
<text>to colour the structure by Evolutionary Conservation</text>
-
[[Category: Proteinase inhibitor]]
+
</jmolCheckbox>
-
 
+
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2jot ConSurf].
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Tue Feb 17 09:34:57 2009''
+
<div style="clear:both"></div>
 +
== References ==
 +
<references/>
 +
__TOC__
 +
</StructureSection>
 +
[[Category: Cyriopagopus schmidti]]
 +
[[Category: Large Structures]]
 +
[[Category: Liang S]]
 +
[[Category: Peng K]]

Current revision

Nuclear Magnetic Resonance Studies on Huwentoxin-XI from the Chinese Bird Spider Ornithoctonus huwena

PDB ID 2jot

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools