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1mxi

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{{Seed}}
 
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[[Image:1mxi.png|left|200px]]
 
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==Structure of YibK from Haemophilus influenzae (HI0766): a Methyltransferase with a Cofactor Bound at a Site Formed by a Knot==
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The line below this paragraph, containing "STRUCTURE_1mxi", creates the "Structure Box" on the page.
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<StructureSection load='1mxi' size='340' side='right'caption='[[1mxi]], [[Resolution|resolution]] 1.70&Aring;' scene=''>
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You may change the PDB parameter (which sets the PDB file loaded into the applet)
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== Structural highlights ==
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or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
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<table><tr><td colspan='2'>[[1mxi]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Haemophilus_influenzae Haemophilus influenzae]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1MXI OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1MXI FirstGlance]. <br>
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or leave the SCENE parameter empty for the default display.
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.7&#8491;</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=IOD:IODIDE+ION'>IOD</scene>, <scene name='pdbligand=SAH:S-ADENOSYL-L-HOMOCYSTEINE'>SAH</scene></td></tr>
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{{STRUCTURE_1mxi| PDB=1mxi | SCENE= }}
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1mxi FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1mxi OCA], [https://pdbe.org/1mxi PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1mxi RCSB], [https://www.ebi.ac.uk/pdbsum/1mxi PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1mxi ProSAT]</span></td></tr>
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</table>
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== Function ==
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[https://www.uniprot.org/uniprot/TRML_HAEIN TRML_HAEIN] Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S-adenosyl-L-methionine to the 2'-OH of the wobble nucleotide.[HAMAP-Rule:MF_01885]
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== Evolutionary Conservation ==
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[[Image:Consurf_key_small.gif|200px|right]]
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Check<jmol>
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<jmolCheckbox>
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<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/mx/1mxi_consurf.spt"</scriptWhenChecked>
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<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
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<text>to colour the structure by Evolutionary Conservation</text>
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</jmolCheckbox>
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1mxi ConSurf].
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<div style="clear:both"></div>
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===Structure of YibK from Haemophilus influenzae (HI0766): a Methyltransferase with a Cofactor Bound at a Site Formed by a Knot===
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==See Also==
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*[[TRNA methyltransferase 3D structures|TRNA methyltransferase 3D structures]]
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__TOC__
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</StructureSection>
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The line below this paragraph, {{ABSTRACT_PUBMED_12596263}}, adds the Publication Abstract to the page
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(as it appears on PubMed at http://www.pubmed.gov), where 12596263 is the PubMed ID number.
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-->
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{{ABSTRACT_PUBMED_12596263}}
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==About this Structure==
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1MXI is a 1 chain structure of sequence from [http://en.wikipedia.org/wiki/Haemophilus_influenzae Haemophilus influenzae]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1MXI OCA].
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==Reference==
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<ref group="xtra">PMID:12596263</ref><references group="xtra"/>
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[[Category: Haemophilus influenzae]]
[[Category: Haemophilus influenzae]]
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[[Category: Bonander, N.]]
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[[Category: Large Structures]]
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[[Category: Eisenstein, E.]]
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[[Category: Bonander N]]
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[[Category: Herzberg, O.]]
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[[Category: Eisenstein E]]
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[[Category: Howard, A.]]
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[[Category: Herzberg O]]
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[[Category: Lim, K.]]
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[[Category: Howard A]]
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[[Category: S2F, Structure 2.Function Project.]]
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[[Category: Lim K]]
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[[Category: Tempczyk, A.]]
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[[Category: Tempczyk A]]
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[[Category: Toedt, J.]]
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[[Category: Toedt J]]
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[[Category: Zhang, H.]]
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[[Category: Zhang H]]
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[[Category: Methyltransferase]]
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[[Category: S-adenosylhomocysteine]]
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[[Category: S2f]]
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[[Category: Spou family]]
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[[Category: Structural genomic]]
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[[Category: Structure 2 function project]]
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Tue Feb 17 09:58:27 2009''
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Current revision

Structure of YibK from Haemophilus influenzae (HI0766): a Methyltransferase with a Cofactor Bound at a Site Formed by a Knot

PDB ID 1mxi

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