1h31

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (11:27, 27 March 2024) (edit) (undo)
 
(11 intermediate revisions not shown.)
Line 1: Line 1:
-
{{Seed}}
 
-
[[Image:1h31.png|left|200px]]
 
-
<!--
+
==Oxidised SoxAX complex from Rhodovulum sulfidophilum==
-
The line below this paragraph, containing "STRUCTURE_1h31", creates the "Structure Box" on the page.
+
<StructureSection load='1h31' size='340' side='right'caption='[[1h31]], [[Resolution|resolution]] 2.55&Aring;' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[1h31]] is a 8 chain structure with sequence from [https://en.wikipedia.org/wiki/Rhodovulum_sulfidophilum Rhodovulum sulfidophilum]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1H31 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1H31 FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.55&#8491;</td></tr>
-
-->
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CSS:S-MERCAPTOCYSTEINE'>CSS</scene>, <scene name='pdbligand=HEC:HEME+C'>HEC</scene></td></tr>
-
{{STRUCTURE_1h31| PDB=1h31 | SCENE= }}
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1h31 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1h31 OCA], [https://pdbe.org/1h31 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1h31 RCSB], [https://www.ebi.ac.uk/pdbsum/1h31 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1h31 ProSAT]</span></td></tr>
 +
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/SOXA_RHOSU SOXA_RHOSU] C-type diheme cytochrome, which is part of the SoxAX cytochrome complex involved in sulfur oxidation. The SoxAX complex catalyzes the formation of a heterodisulfide bond between the conserved cysteine residue on a sulfur carrier SoxYZ complex subunit SoxY and thiosulfate or other inorganic sulfur substrates. This leads to the liberation of two electrons, which may be transferred from the SoxAX complex to another cytochrome c and which then may be used for reductive CO(2) fixation.<ref>PMID:11523998</ref> <ref>PMID:11567011</ref> <ref>PMID:12411478</ref> <ref>PMID:23060437</ref>
 +
== Evolutionary Conservation ==
 +
[[Image:Consurf_key_small.gif|200px|right]]
 +
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/h3/1h31_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1h31 ConSurf].
 +
<div style="clear:both"></div>
-
===OXIDISED SOXAX COMPLEX FROM RHODOVULUM SULFIDOPHILUM===
+
==See Also==
-
 
+
*[[Cytochrome C 3D structures|Cytochrome C 3D structures]]
-
 
+
== References ==
-
<!--
+
<references/>
-
The line below this paragraph, {{ABSTRACT_PUBMED_12411478}}, adds the Publication Abstract to the page
+
__TOC__
-
(as it appears on PubMed at http://www.pubmed.gov), where 12411478 is the PubMed ID number.
+
</StructureSection>
-
-->
+
[[Category: Large Structures]]
-
{{ABSTRACT_PUBMED_12411478}}
+
-
 
+
-
==About this Structure==
+
-
1H31 is a 8 chains structure of sequences from [http://en.wikipedia.org/wiki/Rhodovulum_sulfidophilum Rhodovulum sulfidophilum]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1H31 OCA].
+
-
 
+
-
==Reference==
+
-
<ref group="xtra">PMID:12411478</ref><references group="xtra"/>
+
[[Category: Rhodovulum sulfidophilum]]
[[Category: Rhodovulum sulfidophilum]]
-
[[Category: Appia-Ayme, C.]]
+
[[Category: Appia-Ayme C]]
-
[[Category: Bamford, V A.]]
+
[[Category: Bamford VA]]
-
[[Category: Berks, B C.]]
+
[[Category: Berks BC]]
-
[[Category: Bruno, S.]]
+
[[Category: Bruno S]]
-
[[Category: Cheesman, M R.]]
+
[[Category: Cheesman MR]]
-
[[Category: Hemmings, A M.]]
+
[[Category: Hemmings AM]]
-
[[Category: Rasmussen, T.]]
+
[[Category: Rasmussen T]]
-
[[Category: Cysteine persulfide heme ligand]]
+
-
[[Category: Cytochrome c]]
+
-
[[Category: Soxax complex]]
+
-
[[Category: Sulfur cycle]]
+
-
[[Category: Thiosulfate oxidation]]
+
-
 
+
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Tue Feb 17 10:33:39 2009''
+

Current revision

Oxidised SoxAX complex from Rhodovulum sulfidophilum

PDB ID 1h31

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools