2rc5

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (09:21, 21 February 2024) (edit) (undo)
 
(8 intermediate revisions not shown.)
Line 1: Line 1:
-
{{Seed}}
 
-
[[Image:2rc5.png|left|200px]]
 
-
<!--
+
==Refined structure of FNR from Leptospira interrogans==
-
The line below this paragraph, containing "STRUCTURE_2rc5", creates the "Structure Box" on the page.
+
<StructureSection load='2rc5' size='340' side='right'caption='[[2rc5]], [[Resolution|resolution]] 2.43&Aring;' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[2rc5]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Leptospira_interrogans Leptospira interrogans]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2RC5 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2RC5 FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.431&#8491;</td></tr>
-
-->
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=FAD:FLAVIN-ADENINE+DINUCLEOTIDE'>FAD</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
-
{{STRUCTURE_2rc5| PDB=2rc5 | SCENE= }}
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2rc5 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2rc5 OCA], [https://pdbe.org/2rc5 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2rc5 RCSB], [https://www.ebi.ac.uk/pdbsum/2rc5 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2rc5 ProSAT]</span></td></tr>
-
 
+
</table>
-
===Refined structure of FNR from Leptospira interrogans===
+
== Function ==
-
 
+
[https://www.uniprot.org/uniprot/Q8EY89_LEPIN Q8EY89_LEPIN]
-
 
+
== Evolutionary Conservation ==
-
<!--
+
[[Image:Consurf_key_small.gif|200px|right]]
-
The line below this paragraph, {{ABSTRACT_PUBMED_17958910}}, adds the Publication Abstract to the page
+
Check<jmol>
-
(as it appears on PubMed at http://www.pubmed.gov), where 17958910 is the PubMed ID number.
+
<jmolCheckbox>
-
-->
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/rc/2rc5_consurf.spt"</scriptWhenChecked>
-
{{ABSTRACT_PUBMED_17958910}}
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
-
 
+
<text>to colour the structure by Evolutionary Conservation</text>
-
==About this Structure==
+
</jmolCheckbox>
-
2RC5 is a 4 chains structure of sequences from [http://en.wikipedia.org/wiki/Leptospira_interrogans Leptospira interrogans]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2RC5 OCA].
+
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2rc5 ConSurf].
-
 
+
<div style="clear:both"></div>
-
==Reference==
+
__TOC__
-
<ref group="xtra">PMID:17958910</ref><references group="xtra"/>
+
</StructureSection>
 +
[[Category: Large Structures]]
[[Category: Leptospira interrogans]]
[[Category: Leptospira interrogans]]
-
[[Category: Catalano-Dupuy, D L.]]
+
[[Category: Catalano-Dupuy DL]]
-
[[Category: Ceccarelli, E A.]]
+
[[Category: Ceccarelli EA]]
-
[[Category: Nascimento, A S.]]
+
[[Category: Nascimento AS]]
-
[[Category: Polikarpov, I.]]
+
[[Category: Polikarpov I]]
-
[[Category: Fad]]
+
-
[[Category: Oxidoreductase]]
+
-
 
+
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Tue Feb 17 10:58:27 2009''
+

Current revision

Refined structure of FNR from Leptospira interrogans

PDB ID 2rc5

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools