1s0h

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (07:25, 25 October 2023) (edit) (undo)
 
(10 intermediate revisions not shown.)
Line 1: Line 1:
-
{{Seed}}
 
-
[[Image:1s0h.png|left|200px]]
 
-
<!--
+
==Structure determination of haemoglobin from Donkey(equus asinus) at 3.0 Angstrom resolution==
-
The line below this paragraph, containing "STRUCTURE_1s0h", creates the "Structure Box" on the page.
+
<StructureSection load='1s0h' size='340' side='right'caption='[[1s0h]], [[Resolution|resolution]] 3.00&Aring;' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[1s0h]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Equus_asinus Equus asinus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1S0H OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1S0H FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 3&#8491;</td></tr>
-
-->
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=HEM:PROTOPORPHYRIN+IX+CONTAINING+FE'>HEM</scene></td></tr>
-
{{STRUCTURE_1s0h| PDB=1s0h | SCENE= }}
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1s0h FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1s0h OCA], [https://pdbe.org/1s0h PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1s0h RCSB], [https://www.ebi.ac.uk/pdbsum/1s0h PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1s0h ProSAT]</span></td></tr>
 +
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/HBA_EQUAS HBA_EQUAS] Involved in oxygen transport from the lung to the various peripheral tissues.
 +
== Evolutionary Conservation ==
 +
[[Image:Consurf_key_small.gif|200px|right]]
 +
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/s0/1s0h_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1s0h ConSurf].
 +
<div style="clear:both"></div>
 +
<div style="background-color:#fffaf0;">
 +
== Publication Abstract from PubMed ==
 +
Haemoglobin from donkey was purified and crystallized in space group C2. The present donkey haemoglobin model comprises of two subunits alpha and beta. These alpha and beta subunits comprise of 141 and 146 amino acid residues, respectively, and the haem groups. The donkey haemoglobin differs from horse only in two amino acids of alpha-chain (His20 to Asn and Tyr24 to Phe) and these substitutions do not significantly change the secondary structural features of donkey haemoglobin. The haem group region and subunit contacts are closely resemble with that of horse methaemoglobin.
-
===Structure determination of haemoglobin from Donkey(equus asinus) at 3.0 Angstrom resolution===
+
Crystal structure of haemoglobin from donkey (Equus asinus) at 3A resolution.,Balasundaresan D, Saraboji K, Ponnuswamy MN Biochimie. 2006 Jun;88(6):719-23. Epub 2006 Jan 26. PMID:16488065<ref>PMID:16488065</ref>
 +
From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
 +
</div>
 +
<div class="pdbe-citations 1s0h" style="background-color:#fffaf0;"></div>
-
<!--
+
==See Also==
-
The line below this paragraph, {{ABSTRACT_PUBMED_16488065}}, adds the Publication Abstract to the page
+
*[[Hemoglobin 3D structures|Hemoglobin 3D structures]]
-
(as it appears on PubMed at http://www.pubmed.gov), where 16488065 is the PubMed ID number.
+
== References ==
-
-->
+
<references/>
-
{{ABSTRACT_PUBMED_16488065}}
+
__TOC__
-
 
+
</StructureSection>
-
==About this Structure==
+
-
1S0H is a 2 chains structure of sequences from [http://en.wikipedia.org/wiki/Equus_asinus Equus asinus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1S0H OCA].
+
-
 
+
-
==Reference==
+
-
<ref group="xtra">PMID:16488065</ref><references group="xtra"/>
+
[[Category: Equus asinus]]
[[Category: Equus asinus]]
-
[[Category: Balasundaresan, D.]]
+
[[Category: Large Structures]]
-
[[Category: Ponnuswamy, M N.]]
+
[[Category: Balasundaresan D]]
-
[[Category: Saraboji, K.]]
+
[[Category: Ponnuswamy MN]]
-
[[Category: Alpha helix]]
+
[[Category: Saraboji K]]
-
[[Category: Dimer]]
+
-
 
+
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Tue Feb 17 11:50:28 2009''
+

Current revision

Structure determination of haemoglobin from Donkey(equus asinus) at 3.0 Angstrom resolution

PDB ID 1s0h

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools