This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


1n7y

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (07:53, 14 February 2024) (edit) (undo)
 
(11 intermediate revisions not shown.)
Line 1: Line 1:
-
{{Seed}}
 
-
[[Image:1n7y.png|left|200px]]
 
-
<!--
+
==STREPTAVIDIN MUTANT N23E AT 1.96A==
-
The line below this paragraph, containing "STRUCTURE_1n7y", creates the "Structure Box" on the page.
+
<StructureSection load='1n7y' size='340' side='right'caption='[[1n7y]], [[Resolution|resolution]] 1.96&Aring;' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[1n7y]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Streptomyces_avidinii Streptomyces avidinii]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1N7Y OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1N7Y FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.96&#8491;</td></tr>
-
-->
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1n7y FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1n7y OCA], [https://pdbe.org/1n7y PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1n7y RCSB], [https://www.ebi.ac.uk/pdbsum/1n7y PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1n7y ProSAT]</span></td></tr>
-
{{STRUCTURE_1n7y| PDB=1n7y | SCENE= }}
+
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/SAV_STRAV SAV_STRAV] The biological function of streptavidin is not known. Forms a strong non-covalent specific complex with biotin (one molecule of biotin per subunit of streptavidin).
 +
== Evolutionary Conservation ==
 +
[[Image:Consurf_key_small.gif|200px|right]]
 +
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/n7/1n7y_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1n7y ConSurf].
 +
<div style="clear:both"></div>
-
===STREPTAVIDIN MUTANT N23E AT 1.96A===
+
==See Also==
-
 
+
*[[Avidin 3D structures|Avidin 3D structures]]
-
 
+
__TOC__
-
<!--
+
</StructureSection>
-
The line below this paragraph, {{ABSTRACT_PUBMED_12925786}}, adds the Publication Abstract to the page
+
[[Category: Large Structures]]
-
(as it appears on PubMed at http://www.pubmed.gov), where 12925786 is the PubMed ID number.
+
-
-->
+
-
{{ABSTRACT_PUBMED_12925786}}
+
-
 
+
-
==About this Structure==
+
-
1N7Y is a 4 chains structure of sequences from [http://en.wikipedia.org/wiki/Streptomyces_avidinii Streptomyces avidinii]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1N7Y OCA].
+
-
 
+
-
==Reference==
+
-
<ref group="xtra">PMID:12925786</ref><references group="xtra"/>
+
[[Category: Streptomyces avidinii]]
[[Category: Streptomyces avidinii]]
-
[[Category: Chu, V.]]
+
[[Category: Chu V]]
-
[[Category: Freitag, S.]]
+
[[Category: Freitag S]]
-
[[Category: Klumb, L A.]]
+
[[Category: Klumb LA]]
-
[[Category: Stayton, P S.]]
+
[[Category: Le Trong I]]
-
[[Category: Stenkamp, R E.]]
+
[[Category: Stayton PS]]
-
[[Category: Trong, I Le.]]
+
[[Category: Stenkamp RE]]
-
[[Category: Homotetramer]]
+
-
 
+
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Tue Feb 17 12:09:08 2009''
+

Current revision

STREPTAVIDIN MUTANT N23E AT 1.96A

PDB ID 1n7y

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools