2qor

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (08:34, 30 October 2024) (edit) (undo)
 
(9 intermediate revisions not shown.)
Line 1: Line 1:
-
{{Seed}}
 
-
[[Image:2qor.png|left|200px]]
 
-
<!--
+
==Crystal structure of Plasmodium vivax guanylate kinase==
-
The line below this paragraph, containing "STRUCTURE_2qor", creates the "Structure Box" on the page.
+
<StructureSection load='2qor' size='340' side='right'caption='[[2qor]], [[Resolution|resolution]] 1.80&Aring;' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[2qor]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Plasmodium_vivax Plasmodium vivax]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2QOR OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2QOR FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.8&#8491;</td></tr>
-
-->
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=5GP:GUANOSINE-5-MONOPHOSPHATE'>5GP</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>, <scene name='pdbligand=POP:PYROPHOSPHATE+2-'>POP</scene></td></tr>
-
{{STRUCTURE_2qor| PDB=2qor | SCENE= }}
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2qor FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2qor OCA], [https://pdbe.org/2qor PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2qor RCSB], [https://www.ebi.ac.uk/pdbsum/2qor PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2qor ProSAT]</span></td></tr>
 +
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/A5K709_PLAVS A5K709_PLAVS]
 +
== Evolutionary Conservation ==
 +
[[Image:Consurf_key_small.gif|200px|right]]
 +
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/qo/2qor_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2qor ConSurf].
 +
<div style="clear:both"></div>
-
===Crystal structure of Plasmodium vivax guanylate kinase===
+
==See Also==
-
 
+
*[[Guanylate kinase 3D structures|Guanylate kinase 3D structures]]
-
 
+
__TOC__
-
==About this Structure==
+
</StructureSection>
-
2QOR is a 1 chain structure of sequence from [http://en.wikipedia.org/wiki/Plasmodium_vivax Plasmodium vivax]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2QOR OCA].
+
[[Category: Large Structures]]
-
[[Category: Guanylate kinase]]
+
[[Category: Plasmodium vivax]]
[[Category: Plasmodium vivax]]
-
[[Category: Merritt, E A.]]
+
[[Category: Le Trong I]]
-
[[Category: SGPP, Structural Genomics of Pathogenic Protozoa Consortium.]]
+
[[Category: Merritt EA]]
-
[[Category: Trong, I Le.]]
+
-
[[Category: Kinase]]
+
-
[[Category: Phosphotransferase]]
+
-
[[Category: Protein structure initiative]]
+
-
[[Category: Psi]]
+
-
[[Category: Purine metabolism]]
+
-
[[Category: Sgpp]]
+
-
[[Category: Structural genomic]]
+
-
[[Category: Structural genomics of pathogenic protozoa consortium]]
+
-
 
+
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Tue Feb 17 12:31:20 2009''
+

Current revision

Crystal structure of Plasmodium vivax guanylate kinase

PDB ID 2qor

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools