2psd

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (09:11, 21 February 2024) (edit) (undo)
 
(10 intermediate revisions not shown.)
Line 1: Line 1:
-
{{Seed}}
 
-
[[Image:2psd.png|left|200px]]
 
-
<!--
+
==Crystal Structures of the Luciferase and Green Fluorescent Protein from Renilla Reniformis==
-
The line below this paragraph, containing "STRUCTURE_2psd", creates the "Structure Box" on the page.
+
<StructureSection load='2psd' size='340' side='right'caption='[[2psd]], [[Resolution|resolution]] 1.40&Aring;' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[2psd]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Renilla_reniformis Renilla reniformis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2PSD OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2PSD FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.4&#8491;</td></tr>
-
-->
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=IMD:IMIDAZOLE'>IMD</scene></td></tr>
-
{{STRUCTURE_2psd| PDB=2psd | SCENE= }}
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2psd FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2psd OCA], [https://pdbe.org/2psd PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2psd RCSB], [https://www.ebi.ac.uk/pdbsum/2psd PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2psd ProSAT]</span></td></tr>
 +
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/LUCI_RENRE LUCI_RENRE]
 +
== Evolutionary Conservation ==
 +
[[Image:Consurf_key_small.gif|200px|right]]
 +
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ps/2psd_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2psd ConSurf].
 +
<div style="clear:both"></div>
-
===Crystal Structures of the Luciferase and Green Fluorescent Protein from Renilla Reniformis===
+
==See Also==
-
 
+
*[[Luciferase 3D structures|Luciferase 3D structures]]
-
 
+
__TOC__
-
<!--
+
</StructureSection>
-
The line below this paragraph, {{ABSTRACT_PUBMED_17980388}}, adds the Publication Abstract to the page
+
[[Category: Large Structures]]
-
(as it appears on PubMed at http://www.pubmed.gov), where 17980388 is the PubMed ID number.
+
-
-->
+
-
{{ABSTRACT_PUBMED_17980388}}
+
-
 
+
-
==About this Structure==
+
-
2PSD is a 1 chain structure of sequence from [http://en.wikipedia.org/wiki/Renilla_reniformis Renilla reniformis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2PSD OCA].
+
-
 
+
-
==Reference==
+
-
<ref group="xtra">PMID:17980388</ref><references group="xtra"/>
+
[[Category: Renilla reniformis]]
[[Category: Renilla reniformis]]
-
[[Category: Renilla-luciferin 2-monooxygenase]]
+
[[Category: Fenn TD]]
-
[[Category: Fenn, T D.]]
+
[[Category: Gambhir SS]]
-
[[Category: Gambhir, S S.]]
+
[[Category: Loening AM]]
-
[[Category: Loening, A M.]]
+
-
[[Category: Alpha/beta-hydrolase]]
+
-
[[Category: Luciferase]]
+
-
[[Category: Oxidoreductase]]
+
-
 
+
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Tue Feb 17 12:34:05 2009''
+

Current revision

Crystal Structures of the Luciferase and Green Fluorescent Protein from Renilla Reniformis

PDB ID 2psd

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools