This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


1k0j

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (07:43, 7 February 2024) (edit) (undo)
 
(9 intermediate revisions not shown.)
Line 1: Line 1:
-
{{Seed}}
 
-
[[Image:1k0j.png|left|200px]]
 
-
<!--
+
==Pseudomonas aeruginosa phbh R220Q in complex with NADPH and free of p-OHB==
-
The line below this paragraph, containing "STRUCTURE_1k0j", creates the "Structure Box" on the page.
+
<StructureSection load='1k0j' size='340' side='right'caption='[[1k0j]], [[Resolution|resolution]] 2.20&Aring;' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[1k0j]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Pseudomonas_aeruginosa Pseudomonas aeruginosa]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1K0J OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1K0J FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.2&#8491;</td></tr>
-
-->
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=FAD:FLAVIN-ADENINE+DINUCLEOTIDE'>FAD</scene>, <scene name='pdbligand=NDP:NADPH+DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE+PHOSPHATE'>NDP</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
-
{{STRUCTURE_1k0j| PDB=1k0j | SCENE= }}
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1k0j FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1k0j OCA], [https://pdbe.org/1k0j PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1k0j RCSB], [https://www.ebi.ac.uk/pdbsum/1k0j PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1k0j ProSAT]</span></td></tr>
 +
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/PHHY_PSEAE PHHY_PSEAE]
 +
== Evolutionary Conservation ==
 +
[[Image:Consurf_key_small.gif|200px|right]]
 +
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/k0/1k0j_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1k0j ConSurf].
 +
<div style="clear:both"></div>
-
===Pseudomonas aeruginosa phbh R220Q in complex with NADPH and free of p-OHB===
+
==See Also==
-
 
+
*[[Hydroxylases 3D structures|Hydroxylases 3D structures]]
-
 
+
__TOC__
-
<!--
+
</StructureSection>
-
The line below this paragraph, {{ABSTRACT_PUBMED_11805318}}, adds the Publication Abstract to the page
+
[[Category: Large Structures]]
-
(as it appears on PubMed at http://www.pubmed.gov), where 11805318 is the PubMed ID number.
+
-
-->
+
-
{{ABSTRACT_PUBMED_11805318}}
+
-
 
+
-
==About this Structure==
+
-
1K0J is a 1 chain structure of sequence from [http://en.wikipedia.org/wiki/Pseudomonas_aeruginosa Pseudomonas aeruginosa]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1K0J OCA].
+
-
 
+
-
==Reference==
+
-
<ref group="xtra">PMID:11805318</ref><references group="xtra"/>
+
-
[[Category: 4-hydroxybenzoate 3-monooxygenase]]
+
[[Category: Pseudomonas aeruginosa]]
[[Category: Pseudomonas aeruginosa]]
-
[[Category: Ballou, D.]]
+
[[Category: Ballou D]]
-
[[Category: Entsch, B.]]
+
[[Category: Entsch B]]
-
[[Category: Gatti, D L.]]
+
[[Category: Gatti DL]]
-
[[Category: Ortiz-Maldonado, M.]]
+
[[Category: Ortiz-Maldonado M]]
-
[[Category: Wang, J.]]
+
[[Category: Wang J]]
-
[[Category: Fad]]
+
-
[[Category: Mechanism]]
+
-
[[Category: Nadph]]
+
-
[[Category: Phbh]]
+
-
[[Category: Structure]]
+
-
 
+
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Tue Feb 17 13:14:04 2009''
+

Current revision

Pseudomonas aeruginosa phbh R220Q in complex with NADPH and free of p-OHB

PDB ID 1k0j

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools