This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.

Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


1bzw

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (06:40, 7 February 2024) (edit) (undo)
 
(12 intermediate revisions not shown.)
Line 1: Line 1:
-
{{Seed}}
 
-
[[Image:1bzw.png|left|200px]]
 
-
<!--
+
==PEANUT LECTIN COMPLEXED WITH C-LACTOSE==
-
The line below this paragraph, containing "STRUCTURE_1bzw", creates the "Structure Box" on the page.
+
<StructureSection load='1bzw' size='340' side='right'caption='[[1bzw]], [[Resolution|resolution]] 2.70&Aring;' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[1bzw]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Arachis_hypogaea Arachis hypogaea]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1BZW OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1BZW FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.7&#8491;</td></tr>
-
-->
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=BGC:BETA-D-GLUCOSE'>BGC</scene>, <scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=GAL:BETA-D-GALACTOSE'>GAL</scene>, <scene name='pdbligand=GLC:ALPHA-D-GLUCOSE'>GLC</scene>, <scene name='pdbligand=MN:MANGANESE+(II)+ION'>MN</scene>, <scene name='pdbligand=PRD_900004:beta-lactose'>PRD_900004</scene>, <scene name='pdbligand=PRD_900008:alpha-lactose'>PRD_900008</scene></td></tr>
-
{{STRUCTURE_1bzw| PDB=1bzw | SCENE= }}
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1bzw FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1bzw OCA], [https://pdbe.org/1bzw PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1bzw RCSB], [https://www.ebi.ac.uk/pdbsum/1bzw PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1bzw ProSAT]</span></td></tr>
 +
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/LECG_ARAHY LECG_ARAHY] D-galactose specific lectin.
 +
== Evolutionary Conservation ==
 +
[[Image:Consurf_key_small.gif|200px|right]]
 +
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/bz/1bzw_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1bzw ConSurf].
 +
<div style="clear:both"></div>
-
===PEANUT LECTIN COMPLEXED WITH C-LACTOSE===
+
==See Also==
-
 
+
*[[Agglutinin 3D structures|Agglutinin 3D structures]]
-
 
+
*[[Galactose-binding lectin|Galactose-binding lectin]]
-
==About this Structure==
+
__TOC__
-
1BZW is a 4 chains structure of sequences from [http://en.wikipedia.org/wiki/Arachis_hypogaea Arachis hypogaea]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1BZW OCA].
+
</StructureSection>
[[Category: Arachis hypogaea]]
[[Category: Arachis hypogaea]]
-
[[Category: Kishi, Y.]]
+
[[Category: Large Structures]]
-
[[Category: Lim, S.]]
+
[[Category: Kishi Y]]
-
[[Category: Ravishankar, R.]]
+
[[Category: Lim S]]
-
[[Category: Surolia, A.]]
+
[[Category: Ravishankar R]]
-
[[Category: Vijayan, M.]]
+
[[Category: Surolia A]]
-
[[Category: Agglutinin]]
+
[[Category: Vijayan M]]
-
[[Category: C-lactose]]
+
-
[[Category: Carbohydrate specificity]]
+
-
[[Category: Lectin]]
+
-
[[Category: Legume lectin]]
+
-
[[Category: Protein crystallography]]
+
-
[[Category: Water bridge]]
+
-
 
+
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Tue Feb 17 13:52:34 2009''
+

Current revision

PEANUT LECTIN COMPLEXED WITH C-LACTOSE

PDB ID 1bzw

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/1bzw"
Personal tools