1j27

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (23:41, 27 December 2023) (edit) (undo)
 
(8 intermediate revisions not shown.)
Line 1: Line 1:
-
{{Seed}}
 
-
[[Image:1j27.png|left|200px]]
 
-
<!--
+
==Crystal structure of a hypothetical protein, TT1725, from Thermus thermophilus HB8 at 1.7A resolution==
-
The line below this paragraph, containing "STRUCTURE_1j27", creates the "Structure Box" on the page.
+
<StructureSection load='1j27' size='340' side='right'caption='[[1j27]], [[Resolution|resolution]] 1.70&Aring;' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[1j27]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Thermus_thermophilus_HB8 Thermus thermophilus HB8]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1J27 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1J27 FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.7&#8491;</td></tr>
-
-->
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1j27 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1j27 OCA], [https://pdbe.org/1j27 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1j27 RCSB], [https://www.ebi.ac.uk/pdbsum/1j27 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1j27 ProSAT], [https://www.topsan.org/Proteins/RSGI/1j27 TOPSAN]</span></td></tr>
-
{{STRUCTURE_1j27| PDB=1j27 | SCENE= }}
+
</table>
-
 
+
== Function ==
-
===Crystal structure of a hypothetical protein, TT1725, from Thermus thermophilus HB8 at 1.7A resolution===
+
[https://www.uniprot.org/uniprot/Q84BR1_THETH Q84BR1_THETH]
-
 
+
== Evolutionary Conservation ==
-
 
+
[[Image:Consurf_key_small.gif|200px|right]]
-
==About this Structure==
+
Check<jmol>
-
1J27 is a 1 chain structure of sequence from [http://en.wikipedia.org/wiki/Thermus_thermophilus Thermus thermophilus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1J27 OCA].
+
<jmolCheckbox>
-
 
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/j2/1j27_consurf.spt"</scriptWhenChecked>
-
==Reference==
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
-
<ref group="xtra">PMID:14579367</ref><references group="xtra"/>
+
<text>to colour the structure by Evolutionary Conservation</text>
-
[[Category: Thermus thermophilus]]
+
</jmolCheckbox>
-
[[Category: Kuramitsu, S.]]
+
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1j27 ConSurf].
-
[[Category: Murayama, K.]]
+
<div style="clear:both"></div>
-
[[Category: RSGI, RIKEN Structural Genomics/Proteomics Initiative.]]
+
__TOC__
-
[[Category: Seto, A.]]
+
</StructureSection>
-
[[Category: Shirouzu, M.]]
+
[[Category: Large Structures]]
-
[[Category: Terada, T.]]
+
[[Category: Thermus thermophilus HB8]]
-
[[Category: Yokoyama, S.]]
+
[[Category: Kuramitsu S]]
-
[[Category: Hypothetical protein from thermus thermophilus hb8]]
+
[[Category: Murayama K]]
-
[[Category: Mad]]
+
[[Category: Seto A]]
-
[[Category: Riken structural genomics/proteomics initiative]]
+
[[Category: Shirouzu M]]
-
[[Category: Rsgi]]
+
[[Category: Terada T]]
-
[[Category: Structural genomic]]
+
[[Category: Yokoyama S]]
-
 
+
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Tue Feb 17 13:52:42 2009''
+

Current revision

Crystal structure of a hypothetical protein, TT1725, from Thermus thermophilus HB8 at 1.7A resolution

PDB ID 1j27

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools