2e2r

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{{Seed}}
 
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[[Image:2e2r.png|left|200px]]
 
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==Crystal structure of human estrogen-related receptor gamma ligand binding domain complex with bisphenol A==
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The line below this paragraph, containing "STRUCTURE_2e2r", creates the "Structure Box" on the page.
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<StructureSection load='2e2r' size='340' side='right'caption='[[2e2r]], [[Resolution|resolution]] 1.60&Aring;' scene=''>
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You may change the PDB parameter (which sets the PDB file loaded into the applet)
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== Structural highlights ==
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or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
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<table><tr><td colspan='2'>[[2e2r]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2E2R OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2E2R FirstGlance]. <br>
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or leave the SCENE parameter empty for the default display.
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.6&#8491;</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=2OH:4,4-PROPANE-2,2-DIYLDIPHENOL'>2OH</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene></td></tr>
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{{STRUCTURE_2e2r| PDB=2e2r | SCENE= }}
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2e2r FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2e2r OCA], [https://pdbe.org/2e2r PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2e2r RCSB], [https://www.ebi.ac.uk/pdbsum/2e2r PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2e2r ProSAT]</span></td></tr>
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</table>
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== Function ==
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[https://www.uniprot.org/uniprot/ERR3_HUMAN ERR3_HUMAN] Orphan receptor that acts as transcription activator in the absence of bound ligand. Binds specifically to an estrogen response element and activates reporter genes controlled by estrogen response elements (By similarity).<ref>PMID:19067653</ref> <ref>PMID:18063693</ref> <ref>PMID:11864604</ref>
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== Evolutionary Conservation ==
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[[Image:Consurf_key_small.gif|200px|right]]
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Check<jmol>
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<jmolCheckbox>
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<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/e2/2e2r_consurf.spt"</scriptWhenChecked>
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<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
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<text>to colour the structure by Evolutionary Conservation</text>
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</jmolCheckbox>
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2e2r ConSurf].
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<div style="clear:both"></div>
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<div style="background-color:#fffaf0;">
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== Publication Abstract from PubMed ==
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Many lines of evidence reveal that bisphenol A (BPA) functions at very low doses as an endocrine disruptor. The human estrogen-related receptor gamma (ERR gamma) behaves as a constitutive activator of transcription, although the endogenous ligand is unknown. We have recently demonstrated that BPA binds strongly to ERR gamma (K(D) = 5.5 nM), but not to the estrogen receptor (ER). BPA preserves the ERR gamma's basal constitutive activity, and protects the selective ER modulator 4-hydroxytamoxifen from its deactivation of ERR gamma. In order to shed light on a molecular mechanism, we carried out the X-ray analysis of crystal structure of the ERR gamma ligand-binding domain (LBD) complexed with BPA. BPA binds to the receptor cavity without changing any internal structures of the pocket of the ERR gamma-LBD apo form. The hydrogen bonds of two phenol-hydroxyl groups, one with both Glu275 and Arg316, the other with Asn346, anchor BPA in the pocket, and surrounding hydrophobic bonds, especially with Tyr326, complete BPA's strong binding. Maintaining the 'activation helix' (helix 12) in an active conformation would as a result preserve receptor constitutive activity. Our results present the first evidence that the nuclear receptor forms complexes with the endocrine disruptor, providing detailed molecular insight into the interaction features.
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===Crystal structure of human estrogen-related receptor gamma ligand binding domain complex with bisphenol A===
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Structural evidence for endocrine disruptor bisphenol A binding to human nuclear receptor ERR gamma.,Matsushima A, Kakuta Y, Teramoto T, Koshiba T, Liu X, Okada H, Tokunaga T, Kawabata S, Kimura M, Shimohigashi Y J Biochem. 2007 Oct;142(4):517-24. Epub 2007 Aug 30. PMID:17761695<ref>PMID:17761695</ref>
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From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
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</div>
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<div class="pdbe-citations 2e2r" style="background-color:#fffaf0;"></div>
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==See Also==
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The line below this paragraph, {{ABSTRACT_PUBMED_17761695}}, adds the Publication Abstract to the page
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*[[Estrogen-related receptor 3D structures|Estrogen-related receptor 3D structures]]
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(as it appears on PubMed at http://www.pubmed.gov), where 17761695 is the PubMed ID number.
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== References ==
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<references/>
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{{ABSTRACT_PUBMED_17761695}}
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__TOC__
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</StructureSection>
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==About this Structure==
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2E2R is a 1 chain structure of sequence from [http://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2E2R OCA].
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==Reference==
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<ref group="xtra">PMID:17761695</ref><references group="xtra"/>
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[[Category: Homo sapiens]]
[[Category: Homo sapiens]]
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[[Category: Kakuta, Y.]]
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[[Category: Large Structures]]
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[[Category: Kimura, M.]]
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[[Category: Kakuta Y]]
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[[Category: Koshiba, T.]]
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[[Category: Kimura M]]
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[[Category: Matsushima, A.]]
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[[Category: Koshiba T]]
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[[Category: Shimohigashi, Y.]]
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[[Category: Matsushima A]]
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[[Category: Teramoto, T.]]
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[[Category: Shimohigashi Y]]
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[[Category: Bpa]]
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[[Category: Teramoto T]]
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[[Category: Err gamma]]
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[[Category: Nuclear receptor]]
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[[Category: Transcription]]
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Tue Feb 17 14:03:19 2009''
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Current revision

Crystal structure of human estrogen-related receptor gamma ligand binding domain complex with bisphenol A

PDB ID 2e2r

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