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1mow

From Proteopedia

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{{Seed}}
 
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[[Image:1mow.png|left|200px]]
 
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<!--
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==E-DreI==
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The line below this paragraph, containing "STRUCTURE_1mow", creates the "Structure Box" on the page.
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<StructureSection load='1mow' size='340' side='right'caption='[[1mow]], [[Resolution|resolution]] 2.40&Aring;' scene=''>
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You may change the PDB parameter (which sets the PDB file loaded into the applet)
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== Structural highlights ==
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or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
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<table><tr><td colspan='2'>[[1mow]] is a 12 chain structure with sequence from [https://en.wikipedia.org/wiki/Chlamydomonas_reinhardtii Chlamydomonas reinhardtii] and [https://en.wikipedia.org/wiki/Desulfurococcus_mucosus Desulfurococcus mucosus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1MOW OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1MOW FirstGlance]. <br>
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or leave the SCENE parameter empty for the default display.
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.4&#8491;</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
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{{STRUCTURE_1mow| PDB=1mow | SCENE= }}
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1mow FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1mow OCA], [https://pdbe.org/1mow PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1mow RCSB], [https://www.ebi.ac.uk/pdbsum/1mow PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1mow ProSAT]</span></td></tr>
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</table>
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== Function ==
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[https://www.uniprot.org/uniprot/DMO1_DESMO DMO1_DESMO] Endonuclease involved in intron homing. Recognizes a recognizes up to 20 bp of DNA in the 23S rRNA gene intron. It has a slow turnover rate and cuts the coding strand with a slight preference over the non-coding strand.[https://www.uniprot.org/uniprot/DNE1_CHLRE DNE1_CHLRE] Endonuclease involved in group I intron homing. Recognizes and cleaves a 19-24 bp palindromic DNA site.
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== Evolutionary Conservation ==
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[[Image:Consurf_key_small.gif|200px|right]]
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Check<jmol>
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<jmolCheckbox>
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<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/mo/1mow_consurf.spt"</scriptWhenChecked>
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<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
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<text>to colour the structure by Evolutionary Conservation</text>
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</jmolCheckbox>
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1mow ConSurf].
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<div style="clear:both"></div>
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===E-DreI===
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==See Also==
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*[[Endonuclease 3D structures|Endonuclease 3D structures]]
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__TOC__
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<!--
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</StructureSection>
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The line below this paragraph, {{ABSTRACT_PUBMED_12419232}}, adds the Publication Abstract to the page
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[[Category: Chlamydomonas reinhardtii]]
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(as it appears on PubMed at http://www.pubmed.gov), where 12419232 is the PubMed ID number.
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[[Category: Desulfurococcus mucosus]]
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[[Category: Large Structures]]
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{{ABSTRACT_PUBMED_12419232}}
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[[Category: Baker D]]
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[[Category: Chadsey MS]]
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==About this Structure==
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[[Category: Chevalier BS]]
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1MOW is a 12 chains structure of sequences from [http://en.wikipedia.org/wiki/Desulfurococcus_mobilis_and_chlamydomonas_reinhardtii Desulfurococcus mobilis and chlamydomonas reinhardtii]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1MOW OCA].
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[[Category: Kortemme T]]
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[[Category: Monnat Jr RJ]]
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==Reference==
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[[Category: Stoddard BL]]
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<ref group="xtra">PMID:12419232</ref><references group="xtra"/>
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[[Category: Desulfurococcus mobilis and chlamydomonas reinhardtii]]
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[[Category: Baker, D.]]
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[[Category: Chadsey, M S.]]
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[[Category: Chevalier, B S.]]
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[[Category: Jr., R J.Monnat.]]
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[[Category: Kortemme, T.]]
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[[Category: Stoddard, B L.]]
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[[Category: Design]]
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[[Category: Endonuclease]]
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[[Category: Engineering]]
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[[Category: Homing]]
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[[Category: Laglidadg]]
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[[Category: Structure]]
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Tue Feb 17 15:24:24 2009''
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Current revision

E-DreI

PDB ID 1mow

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