This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


2h01

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (09:49, 30 August 2023) (edit) (undo)
 
(10 intermediate revisions not shown.)
Line 1: Line 1:
-
{{Seed}}
 
-
[[Image:2h01.png|left|200px]]
 
-
<!--
+
==PY00414- Plasmodium yoelii thioredoxin peroxidase I==
-
The line below this paragraph, containing "STRUCTURE_2h01", creates the "Structure Box" on the page.
+
<StructureSection load='2h01' size='340' side='right'caption='[[2h01]], [[Resolution|resolution]] 2.30&Aring;' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[2h01]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Plasmodium_yoelii Plasmodium yoelii]. This structure supersedes the now removed PDB entry [http://oca.weizmann.ac.il/oca-bin/send-pdb?obs=1&id=2feg 2feg]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2H01 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2H01 FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.3&#8491;</td></tr>
-
-->
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2h01 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2h01 OCA], [https://pdbe.org/2h01 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2h01 RCSB], [https://www.ebi.ac.uk/pdbsum/2h01 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2h01 ProSAT]</span></td></tr>
-
{{STRUCTURE_2h01| PDB=2h01 | SCENE= }}
+
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/Q7RSE5_PLAYO Q7RSE5_PLAYO]
 +
== Evolutionary Conservation ==
 +
[[Image:Consurf_key_small.gif|200px|right]]
 +
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/h0/2h01_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2h01 ConSurf].
 +
<div style="clear:both"></div>
-
===PY00414- Plasmodium yoelii thioredoxin peroxidase I===
+
==See Also==
-
 
+
*[[Peroxiredoxin 3D structures|Peroxiredoxin 3D structures]]
-
 
+
__TOC__
-
==About this Structure==
+
</StructureSection>
-
2H01 is a 1 chain structure of sequence from [http://en.wikipedia.org/wiki/Plasmodium_yoelii Plasmodium yoelii]. This structure supersedes the now removed PDB entry [http://oca.weizmann.ac.il/oca-bin/send-pdb?obs=1&id=2feg 2feg]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2H01 OCA].
+
[[Category: Large Structures]]
[[Category: Plasmodium yoelii]]
[[Category: Plasmodium yoelii]]
-
[[Category: Alam, Z.]]
+
[[Category: Alam Z]]
-
[[Category: Arrowsmith, C H.]]
+
[[Category: Arrowsmith CH]]
-
[[Category: Artz, J.]]
+
[[Category: Artz J]]
-
[[Category: Bochkarev, A.]]
+
[[Category: Bochkarev A]]
-
[[Category: Dong, A.]]
+
[[Category: Dong A]]
-
[[Category: Edwards, A M.]]
+
[[Category: Edwards AM]]
-
[[Category: Hui, R.]]
+
[[Category: Hui R]]
-
[[Category: Lew, J.]]
+
[[Category: Lew J]]
-
[[Category: Melone, M.]]
+
[[Category: Melone M]]
-
[[Category: Min, J R.]]
+
[[Category: Min JR]]
-
[[Category: Qiu, W.]]
+
[[Category: Qiu W]]
-
[[Category: SGC, Structural Genomics Consortium.]]
+
[[Category: Sundstrom M]]
-
[[Category: Sundstrom, M.]]
+
[[Category: Weigelt J]]
-
[[Category: Weigelt, J.]]
+
-
[[Category: Oxidoreductase]]
+
-
[[Category: Sgc]]
+
-
[[Category: Structural genomic]]
+
-
[[Category: Structural genomics consortium]]
+
-
[[Category: Thioredoxin peroxidase]]
+
-
 
+
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Tue Feb 17 16:17:35 2009''
+

Current revision

PY00414- Plasmodium yoelii thioredoxin peroxidase I

PDB ID 2h01

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools