1wmw

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (13:32, 13 March 2024) (edit) (undo)
 
(9 intermediate revisions not shown.)
Line 1: Line 1:
-
{{Seed}}
 
-
[[Image:1wmw.png|left|200px]]
 
-
<!--
+
==Crystal structure of geranulgeranyl diphosphate synthase from Thermus thermophilus==
-
The line below this paragraph, containing "STRUCTURE_1wmw", creates the "Structure Box" on the page.
+
<StructureSection load='1wmw' size='340' side='right'caption='[[1wmw]], [[Resolution|resolution]] 1.55&Aring;' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[1wmw]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Thermus_thermophilus_HB8 Thermus thermophilus HB8]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1WMW OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1WMW FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.55&#8491;</td></tr>
-
-->
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1wmw FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1wmw OCA], [https://pdbe.org/1wmw PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1wmw RCSB], [https://www.ebi.ac.uk/pdbsum/1wmw PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1wmw ProSAT], [https://www.topsan.org/Proteins/RSGI/1wmw TOPSAN]</span></td></tr>
-
{{STRUCTURE_1wmw| PDB=1wmw | SCENE= }}
+
</table>
-
 
+
== Function ==
-
===Crystal structure of geranulgeranyl diphosphate synthase from Thermus thermophilus===
+
[https://www.uniprot.org/uniprot/Q5SMD0_THET8 Q5SMD0_THET8]
-
 
+
== Evolutionary Conservation ==
-
 
+
[[Image:Consurf_key_small.gif|200px|right]]
-
==About this Structure==
+
Check<jmol>
-
1WMW is a 4 chains structure of sequences from [http://en.wikipedia.org/wiki/Thermus_thermophilus Thermus thermophilus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1WMW OCA].
+
<jmolCheckbox>
-
 
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/wm/1wmw_consurf.spt"</scriptWhenChecked>
-
==Reference==
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
-
<ref group="xtra">PMID:14684922</ref><references group="xtra"/>
+
<text>to colour the structure by Evolutionary Conservation</text>
-
[[Category: Thermus thermophilus]]
+
</jmolCheckbox>
-
[[Category: Hamada, K.]]
+
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1wmw ConSurf].
-
[[Category: Kawamoto, M.]]
+
<div style="clear:both"></div>
-
[[Category: Kuramitu, S.]]
+
__TOC__
-
[[Category: Miura, K.]]
+
</StructureSection>
-
[[Category: Nakagawa, N.]]
+
[[Category: Large Structures]]
-
[[Category: Nishio, K.]]
+
[[Category: Thermus thermophilus HB8]]
-
[[Category: Nodake, Y.]]
+
[[Category: Hamada K]]
-
[[Category: RSGI, RIKEN Structural Genomics/Proteomics Initiative.]]
+
[[Category: Kawamoto M]]
-
[[Category: Suto, K.]]
+
[[Category: Kuramitu S]]
-
[[Category: Ggpp]]
+
[[Category: Miura K]]
-
[[Category: Prenyl diphosphate synthase]]
+
[[Category: Nakagawa N]]
-
[[Category: Riken structural genomics/proteomics initiative]]
+
[[Category: Nishio K]]
-
[[Category: Rsgi]]
+
[[Category: Nodake Y]]
-
[[Category: Structural genomic]]
+
[[Category: Suto K]]
-
[[Category: Thermus]]
+
-
 
+
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Tue Feb 17 16:35:32 2009''
+

Current revision

Crystal structure of geranulgeranyl diphosphate synthase from Thermus thermophilus

PDB ID 1wmw

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools