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1ya0

From Proteopedia

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{{Seed}}
 
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[[Image:1ya0.png|left|200px]]
 
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==Crystal structure of the N-terminal domain of human SMG7==
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The line below this paragraph, containing "STRUCTURE_1ya0", creates the "Structure Box" on the page.
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<StructureSection load='1ya0' size='340' side='right'caption='[[1ya0]], [[Resolution|resolution]] 2.55&Aring;' scene=''>
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You may change the PDB parameter (which sets the PDB file loaded into the applet)
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== Structural highlights ==
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or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
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<table><tr><td colspan='2'>[[1ya0]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1YA0 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1YA0 FirstGlance]. <br>
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or leave the SCENE parameter empty for the default display.
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.55&#8491;</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
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{{STRUCTURE_1ya0| PDB=1ya0 | SCENE= }}
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1ya0 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1ya0 OCA], [https://pdbe.org/1ya0 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1ya0 RCSB], [https://www.ebi.ac.uk/pdbsum/1ya0 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1ya0 ProSAT]</span></td></tr>
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</table>
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== Function ==
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[https://www.uniprot.org/uniprot/SMG7_HUMAN SMG7_HUMAN] Plays a role in nonsense-mediated mRNA decay. Recruits UPF1 to cytoplasmic mRNA decay bodies. Together with SMG5 is thought to provide a link to the mRNA degradation machinery involving exonucleolytic pathways, and to serve as an adapter for UPF1 to protein phosphatase 2A (PP2A), thereby triggering UPF1 dephosphorylation.<ref>PMID:15546618</ref> <ref>PMID:15721257</ref>
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== Evolutionary Conservation ==
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[[Image:Consurf_key_small.gif|200px|right]]
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Check<jmol>
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<jmolCheckbox>
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<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ya/1ya0_consurf.spt"</scriptWhenChecked>
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<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
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<text>to colour the structure by Evolutionary Conservation</text>
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</jmolCheckbox>
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1ya0 ConSurf].
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<div style="clear:both"></div>
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===Crystal structure of the N-terminal domain of human SMG7===
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==See Also==
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*[[Serine/threonine protein kinase 3D structures|Serine/threonine protein kinase 3D structures]]
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== References ==
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<references/>
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The line below this paragraph, {{ABSTRACT_PUBMED_15721257}}, adds the Publication Abstract to the page
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__TOC__
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(as it appears on PubMed at http://www.pubmed.gov), where 15721257 is the PubMed ID number.
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</StructureSection>
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-->
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{{ABSTRACT_PUBMED_15721257}}
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==About this Structure==
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1YA0 is a 2 chains structure of sequences from [http://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1YA0 OCA].
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==Reference==
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<ref group="xtra">PMID:15721257</ref><references group="xtra"/>
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[[Category: Homo sapiens]]
[[Category: Homo sapiens]]
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[[Category: Conti, E.]]
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[[Category: Large Structures]]
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[[Category: Ebert, J.]]
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[[Category: Conti E]]
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[[Category: Fukuhara, N.]]
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[[Category: Ebert J]]
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[[Category: Izaurralde, E.]]
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[[Category: Fukuhara N]]
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[[Category: Lindner, D.]]
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[[Category: Izaurralde E]]
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[[Category: Unterholzner, L.]]
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[[Category: Lindner D]]
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[[Category: 14-3-3]]
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[[Category: Unterholzner L]]
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[[Category: Alpha-helical repeat]]
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Tue Feb 17 16:42:20 2009''
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Current revision

Crystal structure of the N-terminal domain of human SMG7

PDB ID 1ya0

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