1lv3

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (08:56, 9 May 2024) (edit) (undo)
 
(9 intermediate revisions not shown.)
Line 1: Line 1:
-
{{Seed}}
 
-
[[Image:1lv3.png|left|200px]]
 
-
<!--
+
==Solution NMR Structure of Zinc Finger Protein yacG from Escherichia coli. Northeast Structural Genomics Consortium Target ET92.==
-
The line below this paragraph, containing "STRUCTURE_1lv3", creates the "Structure Box" on the page.
+
<StructureSection load='1lv3' size='340' side='right'caption='[[1lv3]]' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[1lv3]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1LV3 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1LV3 FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Solution NMR</td></tr>
-
-->
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
-
{{STRUCTURE_1lv3| PDB=1lv3 | SCENE= }}
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1lv3 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1lv3 OCA], [https://pdbe.org/1lv3 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1lv3 RCSB], [https://www.ebi.ac.uk/pdbsum/1lv3 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1lv3 ProSAT], [https://www.topsan.org/Proteins/NESGC/1lv3 TOPSAN]</span></td></tr>
-
 
+
</table>
-
===Solution NMR Structure of Zinc Finger Protein yacG from Escherichia coli. Northeast Structural Genomics Consortium Target ET92.===
+
== Function ==
-
 
+
[https://www.uniprot.org/uniprot/YACG_ECOLI YACG_ECOLI] Inhibits all the catalytic activities of DNA gyrase by preventing its interaction with DNA. Acts by binding directly to the C-terminal domain of GyrB, which probably disrupts DNA binding by the gyrase.<ref>PMID:18586829</ref>
-
 
+
== Evolutionary Conservation ==
-
==About this Structure==
+
[[Image:Consurf_key_small.gif|200px|right]]
-
1LV3 is a 1 chain structure of sequence from [http://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1LV3 OCA].
+
Check<jmol>
-
 
+
<jmolCheckbox>
-
==Reference==
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/lv/1lv3_consurf.spt"</scriptWhenChecked>
-
<ref group="xtra">PMID:12211008</ref><references group="xtra"/>
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1lv3 ConSurf].
 +
<div style="clear:both"></div>
 +
== References ==
 +
<references/>
 +
__TOC__
 +
</StructureSection>
[[Category: Escherichia coli]]
[[Category: Escherichia coli]]
-
[[Category: Arrowsmith, C H.]]
+
[[Category: Large Structures]]
-
[[Category: Cort, J R.]]
+
[[Category: Arrowsmith CH]]
-
[[Category: Edwards, A M.]]
+
[[Category: Cort JR]]
-
[[Category: Kennedy, M A.]]
+
[[Category: Edwards AM]]
-
[[Category: NESG, Northeast Structural Genomics Consortium.]]
+
[[Category: Kennedy MA]]
-
[[Category: Ramelot, T A.]]
+
[[Category: Ramelot TA]]
-
[[Category: Semesi, A.]]
+
[[Category: Semesi A]]
-
[[Category: Yee, A A.]]
+
[[Category: Yee AA]]
-
[[Category: Antiparallel beta strand and alpha helix]]
+
-
[[Category: C4 tetrahedral zn+2]]
+
-
[[Category: Et92]]
+
-
[[Category: Nesg project]]
+
-
[[Category: Northeast structural genomics consortium]]
+
-
[[Category: Protein structure initiative]]
+
-
[[Category: Psi]]
+
-
[[Category: Rubredoxin knuckle]]
+
-
[[Category: Structural genomic]]
+
-
[[Category: Zinc finger]]
+
-
 
+
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Tue Feb 17 17:09:17 2009''
+

Current revision

Solution NMR Structure of Zinc Finger Protein yacG from Escherichia coli. Northeast Structural Genomics Consortium Target ET92.

PDB ID 1lv3

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools