1xsv

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (07:39, 30 October 2024) (edit) (undo)
 
(8 intermediate revisions not shown.)
Line 1: Line 1:
-
{{Seed}}
 
-
[[Image:1xsv.png|left|200px]]
 
-
<!--
+
==X-ray crystal structure of conserved hypothetical UPF0122 protein SAV1236 from Staphylococcus aureus subsp. aureus Mu50==
-
The line below this paragraph, containing "STRUCTURE_1xsv", creates the "Structure Box" on the page.
+
<StructureSection load='1xsv' size='340' side='right'caption='[[1xsv]], [[Resolution|resolution]] 1.70&Aring;' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[1xsv]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Staphylococcus_aureus Staphylococcus aureus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1XSV OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1XSV FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.7&#8491;</td></tr>
-
-->
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
-
{{STRUCTURE_1xsv| PDB=1xsv | SCENE= }}
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1xsv FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1xsv OCA], [https://pdbe.org/1xsv PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1xsv RCSB], [https://www.ebi.ac.uk/pdbsum/1xsv PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1xsv ProSAT]</span></td></tr>
-
 
+
</table>
-
===X-ray crystal structure of conserved hypothetical UPF0122 protein SAV1236 from Staphylococcus aureus subsp. aureus Mu50===
+
== Function ==
-
 
+
[https://www.uniprot.org/uniprot/Y1236_STAAM Y1236_STAAM] Might take part in the signal recognition particle (SRP) pathway. This is inferred from the conservation of its genetic proximity to ftsY/ffh. May be a regulatory protein (By similarity).
-
 
+
== Evolutionary Conservation ==
-
==About this Structure==
+
[[Image:Consurf_key_small.gif|200px|right]]
-
1XSV is a 2 chains structure of sequences from [http://en.wikipedia.org/wiki/Staphylococcus_aureus_subsp._aureus Staphylococcus aureus subsp. aureus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1XSV OCA].
+
Check<jmol>
-
[[Category: Staphylococcus aureus subsp. aureus]]
+
<jmolCheckbox>
-
[[Category: Buzadzija, K.]]
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/xs/1xsv_consurf.spt"</scriptWhenChecked>
-
[[Category: Dharamsi, A.]]
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
-
[[Category: Fiebig, K M.]]
+
<text>to colour the structure by Evolutionary Conservation</text>
-
[[Category: Houston, S.]]
+
</jmolCheckbox>
-
[[Category: McDonald, M L.]]
+
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1xsv ConSurf].
-
[[Category: Savchenko, A.]]
+
<div style="clear:both"></div>
-
[[Category: Vedadi, M.]]
+
__TOC__
-
[[Category: Virag, C.]]
+
</StructureSection>
-
[[Category: Walker, J R.]]
+
[[Category: Large Structures]]
-
[[Category: Xu, X.]]
+
[[Category: Staphylococcus aureus]]
-
[[Category: Helix-turn-helix]]
+
[[Category: Buzadzija K]]
-
[[Category: Putative dna-binding protein]]
+
[[Category: Dharamsi A]]
-
[[Category: Signal recognition particle]]
+
[[Category: Fiebig KM]]
-
[[Category: Upf0122]]
+
[[Category: Houston S]]
-
 
+
[[Category: McDonald M-L]]
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Tue Feb 17 17:13:34 2009''
+
[[Category: Savchenko A]]
 +
[[Category: Vedadi M]]
 +
[[Category: Virag C]]
 +
[[Category: Walker JR]]
 +
[[Category: Xu X]]

Current revision

X-ray crystal structure of conserved hypothetical UPF0122 protein SAV1236 from Staphylococcus aureus subsp. aureus Mu50

PDB ID 1xsv

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools